Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.89■□□□□ 0.78
CCDC82Q8N4S0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC82Q8N4S0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC82Q8N4S0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC82Q8N4S0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC82Q8N4S0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC82Q8N4S0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
CCDC82Q8N4S0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 FRMD8P1-201ENST00000440433 1524 ntBASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC82Q8N4S0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 RNA5SP415-201ENST00000517246 115 ntBASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 AC120114.3-201ENST00000611923 658 ntBASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.88■□□□□ 0.77
CCDC82Q8N4S0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CCDC82Q8N4S0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CCDC82Q8N4S0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC82Q8N4S0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC82Q8N4S0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC82Q8N4S0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC82Q8N4S0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
CCDC82Q8N4S0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC82Q8N4S0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC82Q8N4S0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC82Q8N4S0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC82Q8N4S0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC82Q8N4S0 IGHV3-22-201ENST00000520721 359 ntBASIC19.87■□□□□ 0.77
CCDC82Q8N4S0 UNC93B6-202ENST00000528242 690 ntBASIC19.87■□□□□ 0.77
CCDC82Q8N4S0 SLC25A1P1-201ENST00000528351 927 ntBASIC19.87■□□□□ 0.77
CCDC82Q8N4S0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.87■□□□□ 0.77
CCDC82Q8N4S0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
CCDC82Q8N4S0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC82Q8N4S0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC82Q8N4S0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC82Q8N4S0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC82Q8N4S0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC82Q8N4S0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC82Q8N4S0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CCDC82Q8N4S0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC82Q8N4S0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC82Q8N4S0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC82Q8N4S0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC82Q8N4S0 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC82Q8N4S0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC82Q8N4S0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC82Q8N4S0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCDC82Q8N4S0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCDC82Q8N4S0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC82Q8N4S0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC82Q8N4S0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC82Q8N4S0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC82Q8N4S0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC82Q8N4S0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC82Q8N4S0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms