Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC21.48■■□□□ 1.03
PROM2Q8N271 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.48■■□□□ 1.03
PROM2Q8N271 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PROM2Q8N271 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.48■■□□□ 1.03
PROM2Q8N271 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PROM2Q8N271 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC21.48■■□□□ 1.03
PROM2Q8N271 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PROM2Q8N271 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC21.48■■□□□ 1.03
PROM2Q8N271 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PROM2Q8N271 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.48■■□□□ 1.03
PROM2Q8N271 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PROM2Q8N271 MIR1908-201ENST00000410394 80 ntBASIC21.48■■□□□ 1.03
PROM2Q8N271 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PROM2Q8N271 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PROM2Q8N271 AL512361.1-201ENST00000554200 418 ntBASIC21.48■■□□□ 1.03
PROM2Q8N271 ORC6-206ENST00000568364 888 ntTSL 5 BASIC21.48■■□□□ 1.03
PROM2Q8N271 AC105021.1-202ENST00000570572 669 ntBASIC21.48■■□□□ 1.03
PROM2Q8N271 AC091167.2-201ENST00000579581 588 ntBASIC21.48■■□□□ 1.03
PROM2Q8N271 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PROM2Q8N271 TEX48-202ENST00000612244 662 ntTSL 3 BASIC21.48■■□□□ 1.03
PROM2Q8N271 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PROM2Q8N271 AC068587.10-201ENST00000641210 219 ntBASIC21.48■■□□□ 1.03
PROM2Q8N271 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.48■■□□□ 1.03
PROM2Q8N271 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
PROM2Q8N271 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PROM2Q8N271 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PROM2Q8N271 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
PROM2Q8N271 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PROM2Q8N271 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.48■■□□□ 1.03
PROM2Q8N271 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PROM2Q8N271 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PROM2Q8N271 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PROM2Q8N271 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC21.47■■□□□ 1.03
PROM2Q8N271 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PROM2Q8N271 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PROM2Q8N271 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PROM2Q8N271 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
PROM2Q8N271 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PROM2Q8N271 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.47■■□□□ 1.03
PROM2Q8N271 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC21.47■■□□□ 1.03
PROM2Q8N271 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PROM2Q8N271 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC21.47■■□□□ 1.03
PROM2Q8N271 AC092933.1-201ENST00000393644 945 ntBASIC21.47■■□□□ 1.03
PROM2Q8N271 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PROM2Q8N271 AL353705.2-201ENST00000428243 662 ntBASIC21.47■■□□□ 1.03
PROM2Q8N271 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC21.47■■□□□ 1.03
PROM2Q8N271 CROCCP4-201ENST00000457096 498 ntBASIC21.47■■□□□ 1.03
PROM2Q8N271 ELK1P1-201ENST00000485699 580 ntBASIC21.47■■□□□ 1.03
PROM2Q8N271 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC21.47■■□□□ 1.03
PROM2Q8N271 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC21.47■■□□□ 1.03
PROM2Q8N271 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC21.47■■□□□ 1.03
PROM2Q8N271 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC21.47■■□□□ 1.03
PROM2Q8N271 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC21.47■■□□□ 1.03
PROM2Q8N271 AC044860.1-202ENST00000559481 777 ntBASIC21.47■■□□□ 1.03
PROM2Q8N271 AC133552.6-201ENST00000613406 534 ntBASIC21.47■■□□□ 1.03
PROM2Q8N271 5S_rRNA.22-201ENST00000614916 106 ntBASIC21.47■■□□□ 1.03
PROM2Q8N271 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC21.47■■□□□ 1.03
PROM2Q8N271 LINC00895-201ENST00000629028 1637 ntBASIC21.47■■□□□ 1.03
PROM2Q8N271 TOP3BP1-201ENST00000420768 1380 ntBASIC21.47■■□□□ 1.03
PROM2Q8N271 KRT8P44-201ENST00000441609 1350 ntBASIC21.47■■□□□ 1.03
PROM2Q8N271 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC21.47■■□□□ 1.03
PROM2Q8N271 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.47■■□□□ 1.03
PROM2Q8N271 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PROM2Q8N271 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC21.46■■□□□ 1.03
PROM2Q8N271 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC21.46■■□□□ 1.03
PROM2Q8N271 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PROM2Q8N271 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC21.46■■□□□ 1.03
PROM2Q8N271 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PROM2Q8N271 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.46■■□□□ 1.03
PROM2Q8N271 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PROM2Q8N271 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.46■■□□□ 1.03
PROM2Q8N271 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PROM2Q8N271 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PROM2Q8N271 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC21.46■■□□□ 1.03
PROM2Q8N271 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PROM2Q8N271 HIST1H2BPS3-201ENST00000419683 341 ntBASIC21.46■■□□□ 1.03
PROM2Q8N271 AC098850.1-201ENST00000419919 790 ntBASIC21.46■■□□□ 1.03
PROM2Q8N271 CD74-212ENST00000524315 584 ntTSL 5 BASIC21.46■■□□□ 1.03
PROM2Q8N271 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
PROM2Q8N271 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC21.46■■□□□ 1.03
PROM2Q8N271 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC21.46■■□□□ 1.03
PROM2Q8N271 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PROM2Q8N271 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC21.46■■□□□ 1.03
PROM2Q8N271 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
PROM2Q8N271 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC21.46■■□□□ 1.03
PROM2Q8N271 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PROM2Q8N271 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.03
PROM2Q8N271 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC21.45■■□□□ 1.02
PROM2Q8N271 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PROM2Q8N271 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
PROM2Q8N271 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PROM2Q8N271 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PROM2Q8N271 MPV17-208ENST00000405076 603 ntTSL 5 BASIC21.45■■□□□ 1.02
PROM2Q8N271 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PROM2Q8N271 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
PROM2Q8N271 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PROM2Q8N271 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC21.45■■□□□ 1.02
PROM2Q8N271 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC21.45■■□□□ 1.02
PROM2Q8N271 WNT11-204ENST00000621122 789 ntTSL 5 BASIC21.45■■□□□ 1.02
PROM2Q8N271 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms