Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 AC005363.2-201ENST00000618631 242 ntBASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 HYMAI.1-201ENST00000620949 238 ntBASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 AD001527.2-201ENST00000622994 785 ntBASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 AC073912.3-201ENST00000624414 853 ntBASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 RNF216P1-203ENST00000404404 2427 ntBASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 HLA-A-202ENST00000376806 1854 ntBASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 AC117947.1-201ENST00000427448 529 ntBASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 VENTXP7-201ENST00000475503 772 ntBASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 BANP-201ENST00000286122 2368 ntTSL 5 BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
LINC01561Q8N1V8 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 AC023824.1-201ENST00000562945 2975 ntBASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms