Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 TUBB7P-202ENST00000428444 1305 ntBASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 TUBB8P7-204ENST00000567960 1332 ntBASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 LIN28AP1-201ENST00000429574 405 ntBASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 KRT18P38-201ENST00000449496 1282 ntBASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 YBX1P2-201ENST00000489612 999 ntBASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 AC139887.4-201ENST00000607877 719 ntBASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 AC132872.4-202ENST00000622924 2756 ntBASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
LRRTM1Q86UE6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.83□□□□□ -0.03
LRRTM1Q86UE6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
LRRTM1Q86UE6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.83□□□□□ -0.03
LRRTM1Q86UE6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.83□□□□□ -0.03
LRRTM1Q86UE6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
LRRTM1Q86UE6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
LRRTM1Q86UE6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.83□□□□□ -0.03
LRRTM1Q86UE6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LRRTM1Q86UE6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LRRTM1Q86UE6 TSPY26P-202ENST00000565928 3884 ntBASIC14.83□□□□□ -0.03
LRRTM1Q86UE6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 FAM220CP-201ENST00000395253 831 ntBASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 ATP5G1P1-201ENST00000448724 379 ntBASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 STK19B-204ENST00000512515 211 ntBASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 AC005336.2-201ENST00000593183 939 ntBASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 AL353801.3-201ENST00000609898 542 ntBASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 HYMAI.1-201ENST00000620949 238 ntBASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 AL365203.3-201ENST00000609742 2057 ntBASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms