Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PVRIG2P-201ENST00000435460 978 ntBASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 KRT18P23-201ENST00000435622 1283 ntBASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 NUS1P1-201ENST00000446295 882 ntBASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 AC009078.2-202ENST00000463353 338 ntBASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 TOB2P1-201ENST00000469761 992 ntBASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 AC079776.4-201ENST00000511039 504 ntBASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 RNF126P1-202ENST00000569893 925 ntBASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 PKD1P1-201ENST00000458669 6805 ntBASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.83■□□□□ 0.45
FOXR1Q6PIV2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXR1Q6PIV2 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXR1Q6PIV2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.83■□□□□ 0.45
FOXR1Q6PIV2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXR1Q6PIV2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXR1Q6PIV2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.83■□□□□ 0.45
FOXR1Q6PIV2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.83■□□□□ 0.45
FOXR1Q6PIV2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXR1Q6PIV2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXR1Q6PIV2 AL365203.3-201ENST00000609742 2057 ntBASIC17.83■□□□□ 0.45
FOXR1Q6PIV2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
FOXR1Q6PIV2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXR1Q6PIV2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
FOXR1Q6PIV2 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXR1Q6PIV2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 HLA-F-220ENST00000434407 884 ntBASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 KRT17P6-201ENST00000453795 1220 ntBASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 AC138894.3-201ENST00000603787 634 ntBASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 AL121772.3-201ENST00000610840 674 ntBASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 AC126177.1-201ENST00000547829 2218 ntBASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 HLA-J-201ENST00000462773 1622 ntBASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXR1Q6PIV2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 AL031008.1-201ENST00000619963 541 ntBASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 Z83836.1-201ENST00000624605 1642 ntBASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms