Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 KRT8P26-201ENST00000534154 1276 ntBASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 AL121672.3-201ENST00000608644 468 ntBASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 AC091076.1-201ENST00000610741 619 ntBASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 AC116407.2-201ENST00000613639 860 ntBASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 AP000550.4-202ENST00000639755 178 ntBASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 AC090616.6-201ENST00000582640 721 ntBASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 AC116407.4-201ENST00000623319 1061 ntBASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM53Q6P2H8 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TMEM53Q6P2H8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
TMEM53Q6P2H8 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TMEM53Q6P2H8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TMEM53Q6P2H8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TMEM53Q6P2H8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.71■□□□□ 0.1
TMEM53Q6P2H8 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TMEM53Q6P2H8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
TMEM53Q6P2H8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.71■□□□□ 0.1
TMEM53Q6P2H8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 IGHV3-41-201ENST00000613121 348 ntBASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms