Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCKAP1LP55160 AL353732.1-201ENST00000569618 1459 ntBASIC18.61■□□□□ 0.57
NCKAP1LP55160 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NCKAP1LP55160 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCKAP1LP55160 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.61■□□□□ 0.57
NCKAP1LP55160 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NCKAP1LP55160 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.61■□□□□ 0.57
NCKAP1LP55160 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.61■□□□□ 0.57
NCKAP1LP55160 MPDU1-223ENST00000582151 728 ntBASIC18.61■□□□□ 0.57
NCKAP1LP55160 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.61■□□□□ 0.57
NCKAP1LP55160 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.61■□□□□ 0.57
NCKAP1LP55160 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.61■□□□□ 0.57
NCKAP1LP55160 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCKAP1LP55160 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.61■□□□□ 0.57
NCKAP1LP55160 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCKAP1LP55160 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCKAP1LP55160 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCKAP1LP55160 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCKAP1LP55160 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.61■□□□□ 0.57
NCKAP1LP55160 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKAP1LP55160 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKAP1LP55160 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.6■□□□□ 0.57
NCKAP1LP55160 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.6■□□□□ 0.57
NCKAP1LP55160 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NCKAP1LP55160 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.6■□□□□ 0.57
NCKAP1LP55160 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NCKAP1LP55160 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKAP1LP55160 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.6■□□□□ 0.57
NCKAP1LP55160 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NCKAP1LP55160 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKAP1LP55160 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
NCKAP1LP55160 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NCKAP1LP55160 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
NCKAP1LP55160 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.6■□□□□ 0.57
NCKAP1LP55160 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.6■□□□□ 0.57
NCKAP1LP55160 RNA5SP416-201ENST00000516838 111 ntBASIC18.6■□□□□ 0.57
NCKAP1LP55160 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NCKAP1LP55160 PGAM5P1-201ENST00000518923 814 ntBASIC18.6■□□□□ 0.57
NCKAP1LP55160 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.6■□□□□ 0.57
NCKAP1LP55160 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.6■□□□□ 0.57
NCKAP1LP55160 AC018845.2-201ENST00000568326 409 ntBASIC18.6■□□□□ 0.57
NCKAP1LP55160 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKAP1LP55160 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.6■□□□□ 0.57
NCKAP1LP55160 MIR4492-201ENST00000581627 80 ntBASIC18.6■□□□□ 0.57
NCKAP1LP55160 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.6■□□□□ 0.57
NCKAP1LP55160 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKAP1LP55160 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NCKAP1LP55160 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKAP1LP55160 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKAP1LP55160 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NCKAP1LP55160 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKAP1LP55160 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.6■□□□□ 0.57
NCKAP1LP55160 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKAP1LP55160 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKAP1LP55160 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKAP1LP55160 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NCKAP1LP55160 LINC00895-201ENST00000629028 1637 ntBASIC18.6■□□□□ 0.57
NCKAP1LP55160 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKAP1LP55160 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NCKAP1LP55160 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
NCKAP1LP55160 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NCKAP1LP55160 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NCKAP1LP55160 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NCKAP1LP55160 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.59■□□□□ 0.57
NCKAP1LP55160 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKAP1LP55160 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKAP1LP55160 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.59■□□□□ 0.57
NCKAP1LP55160 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKAP1LP55160 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKAP1LP55160 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKAP1LP55160 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.59■□□□□ 0.57
NCKAP1LP55160 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.59■□□□□ 0.57
NCKAP1LP55160 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.59■□□□□ 0.57
NCKAP1LP55160 POLD2P1-201ENST00000511220 997 ntBASIC18.59■□□□□ 0.57
NCKAP1LP55160 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.59■□□□□ 0.57
NCKAP1LP55160 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
NCKAP1LP55160 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NCKAP1LP55160 AC013467.2-201ENST00000605472 835 ntBASIC18.59■□□□□ 0.57
NCKAP1LP55160 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
NCKAP1LP55160 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKAP1LP55160 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKAP1LP55160 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKAP1LP55160 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKAP1LP55160 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
NCKAP1LP55160 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NCKAP1LP55160 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NCKAP1LP55160 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKAP1LP55160 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
NCKAP1LP55160 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKAP1LP55160 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKAP1LP55160 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKAP1LP55160 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
NCKAP1LP55160 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NCKAP1LP55160 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.58■□□□□ 0.57
NCKAP1LP55160 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.58■□□□□ 0.57
NCKAP1LP55160 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NCKAP1LP55160 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
NCKAP1LP55160 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
NCKAP1LP55160 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
NCKAP1LP55160 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms