Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
NEK3P51956 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.62■□□□□ 0.41
NEK3P51956 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.62■□□□□ 0.41
NEK3P51956 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.62■□□□□ 0.41
NEK3P51956 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.62■□□□□ 0.41
NEK3P51956 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.62■□□□□ 0.41
NEK3P51956 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.62■□□□□ 0.41
NEK3P51956 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.62■□□□□ 0.41
NEK3P51956 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.62■□□□□ 0.41
NEK3P51956 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.62■□□□□ 0.41
NEK3P51956 AC008735.5-201ENST00000623544 497 ntBASIC17.62■□□□□ 0.41
NEK3P51956 AC116407.3-201ENST00000623905 1129 ntBASIC17.62■□□□□ 0.41
NEK3P51956 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NEK3P51956 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEK3P51956 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.62■□□□□ 0.41
NEK3P51956 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEK3P51956 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.62■□□□□ 0.41
NEK3P51956 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NEK3P51956 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NEK3P51956 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEK3P51956 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEK3P51956 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.62■□□□□ 0.41
NEK3P51956 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NEK3P51956 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
NEK3P51956 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEK3P51956 FLJ38576-201ENST00000623820 2459 ntBASIC17.61■□□□□ 0.41
NEK3P51956 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEK3P51956 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NEK3P51956 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEK3P51956 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEK3P51956 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEK3P51956 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NEK3P51956 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NEK3P51956 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.61■□□□□ 0.41
NEK3P51956 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEK3P51956 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEK3P51956 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEK3P51956 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NEK3P51956 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.61■□□□□ 0.41
NEK3P51956 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NEK3P51956 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.61■□□□□ 0.41
NEK3P51956 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.61■□□□□ 0.41
NEK3P51956 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.61■□□□□ 0.41
NEK3P51956 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.61■□□□□ 0.41
NEK3P51956 AC004817.3-201ENST00000602957 2129 ntBASIC17.61■□□□□ 0.41
NEK3P51956 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.61■□□□□ 0.41
NEK3P51956 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NEK3P51956 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NEK3P51956 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NEK3P51956 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEK3P51956 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NEK3P51956 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEK3P51956 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
NEK3P51956 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.61■□□□□ 0.41
NEK3P51956 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEK3P51956 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEK3P51956 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NEK3P51956 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEK3P51956 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NEK3P51956 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NEK3P51956 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEK3P51956 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.6■□□□□ 0.41
NEK3P51956 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NEK3P51956 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.6■□□□□ 0.41
NEK3P51956 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEK3P51956 MYCLP1-201ENST00000372451 1075 ntBASIC17.6■□□□□ 0.41
NEK3P51956 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
NEK3P51956 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.6■□□□□ 0.41
NEK3P51956 AC005104.2-201ENST00000427818 678 ntBASIC17.6■□□□□ 0.41
NEK3P51956 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
NEK3P51956 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NEK3P51956 SLC25A1P1-201ENST00000528351 927 ntBASIC17.6■□□□□ 0.41
NEK3P51956 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.6■□□□□ 0.41
NEK3P51956 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
NEK3P51956 STK25P1-201ENST00000585406 838 ntBASIC17.6■□□□□ 0.41
NEK3P51956 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.6■□□□□ 0.41
NEK3P51956 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.6■□□□□ 0.41
NEK3P51956 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.6■□□□□ 0.41
NEK3P51956 AF228730.7-201ENST00000641842 219 ntBASIC17.6■□□□□ 0.41
NEK3P51956 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEK3P51956 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NEK3P51956 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEK3P51956 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEK3P51956 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NEK3P51956 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
NEK3P51956 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
NEK3P51956 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NEK3P51956 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEK3P51956 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEK3P51956 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NEK3P51956 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NEK3P51956 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEK3P51956 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.59■□□□□ 0.41
NEK3P51956 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEK3P51956 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEK3P51956 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NEK3P51956 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.59■□□□□ 0.41
NEK3P51956 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.59■□□□□ 0.41
NEK3P51956 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NEK3P51956 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms