Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.81■□□□□ 0.44
MTHFRP42898 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTHFRP42898 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTHFRP42898 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTHFRP42898 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTHFRP42898 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTHFRP42898 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTHFRP42898 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTHFRP42898 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MTHFRP42898 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.8■□□□□ 0.44
MTHFRP42898 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MTHFRP42898 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
MTHFRP42898 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
MTHFRP42898 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MTHFRP42898 AC067852.2-201ENST00000590513 2313 ntBASIC17.8■□□□□ 0.44
MTHFRP42898 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MTHFRP42898 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.8■□□□□ 0.44
MTHFRP42898 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MTHFRP42898 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.8■□□□□ 0.44
MTHFRP42898 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.8■□□□□ 0.44
MTHFRP42898 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MTHFRP42898 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.8■□□□□ 0.44
MTHFRP42898 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.8■□□□□ 0.44
MTHFRP42898 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.8■□□□□ 0.44
MTHFRP42898 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.8■□□□□ 0.44
MTHFRP42898 KRT18P55-202ENST00000578578 1546 ntBASIC17.8■□□□□ 0.44
MTHFRP42898 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
MTHFRP42898 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MTHFRP42898 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MTHFRP42898 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
MTHFRP42898 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.8■□□□□ 0.44
MTHFRP42898 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MTHFRP42898 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
MTHFRP42898 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.79■□□□□ 0.44
MTHFRP42898 AC135776.1-201ENST00000319817 2481 ntBASIC17.79■□□□□ 0.44
MTHFRP42898 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
MTHFRP42898 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MTHFRP42898 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MTHFRP42898 HTR7P1-202ENST00000624664 4411 ntBASIC17.79■□□□□ 0.44
MTHFRP42898 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.79■□□□□ 0.44
MTHFRP42898 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MTHFRP42898 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
MTHFRP42898 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
MTHFRP42898 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.79■□□□□ 0.44
MTHFRP42898 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MTHFRP42898 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MTHFRP42898 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MTHFRP42898 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MTHFRP42898 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MTHFRP42898 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
MTHFRP42898 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.79■□□□□ 0.44
MTHFRP42898 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.79■□□□□ 0.44
MTHFRP42898 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.79■□□□□ 0.44
MTHFRP42898 AC005412.3-201ENST00000580309 715 ntBASIC17.79■□□□□ 0.44
MTHFRP42898 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MTHFRP42898 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.79■□□□□ 0.44
MTHFRP42898 AL358472.5-202ENST00000641448 1267 ntBASIC17.79■□□□□ 0.44
MTHFRP42898 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
MTHFRP42898 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MTHFRP42898 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MTHFRP42898 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MTHFRP42898 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
MTHFRP42898 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MTHFRP42898 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MTHFRP42898 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.79■□□□□ 0.44
MTHFRP42898 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
MTHFRP42898 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
MTHFRP42898 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
MTHFRP42898 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MTHFRP42898 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MTHFRP42898 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.79■□□□□ 0.44
MTHFRP42898 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.79■□□□□ 0.44
MTHFRP42898 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
MTHFRP42898 AC008677.1-201ENST00000519230 1561 ntBASIC17.79■□□□□ 0.44
MTHFRP42898 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
MTHFRP42898 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MTHFRP42898 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
MTHFRP42898 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MTHFRP42898 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.78■□□□□ 0.44
MTHFRP42898 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.78■□□□□ 0.44
MTHFRP42898 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.78■□□□□ 0.44
MTHFRP42898 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.78■□□□□ 0.44
MTHFRP42898 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
MTHFRP42898 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MTHFRP42898 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MTHFRP42898 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
MTHFRP42898 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
MTHFRP42898 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.78■□□□□ 0.44
MTHFRP42898 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.78■□□□□ 0.44
MTHFRP42898 HMGA1P7-201ENST00000406908 502 ntBASIC17.78■□□□□ 0.44
MTHFRP42898 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.78■□□□□ 0.44
MTHFRP42898 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.78■□□□□ 0.44
MTHFRP42898 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.78■□□□□ 0.44
MTHFRP42898 AC069120.2-201ENST00000524091 540 ntBASIC17.78■□□□□ 0.44
MTHFRP42898 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.78■□□□□ 0.44
MTHFRP42898 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MTHFRP42898 LINC01225-203ENST00000563550 1244 ntBASIC17.78■□□□□ 0.44
MTHFRP42898 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.78■□□□□ 0.44
MTHFRP42898 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
MTHFRP42898 AC027307.3-201ENST00000594262 1100 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms