Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.1□□□□□ -0.15
SNCAP37840 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.1□□□□□ -0.15
SNCAP37840 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SNCAP37840 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 AC116353.5-201ENST00000638148 1699 ntBASIC14.1□□□□□ -0.15
SNCAP37840 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SNCAP37840 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 AC079328.2-201ENST00000561241 3354 ntBASIC14.09□□□□□ -0.15
SNCAP37840 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SNCAP37840 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNCAP37840 REXO1L11P-201ENST00000620964 1927 ntBASIC14.09□□□□□ -0.15
SNCAP37840 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNCAP37840 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNCAP37840 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNCAP37840 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNCAP37840 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SNCAP37840 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.09□□□□□ -0.15
SNCAP37840 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNCAP37840 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNCAP37840 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNCAP37840 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNCAP37840 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SNCAP37840 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SNCAP37840 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SNCAP37840 RASA4DP-201ENST00000460726 1199 ntBASIC14.09□□□□□ -0.15
SNCAP37840 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.09□□□□□ -0.15
SNCAP37840 AL136038.4-201ENST00000603606 1261 ntBASIC14.09□□□□□ -0.15
SNCAP37840 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNCAP37840 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SNCAP37840 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.09□□□□□ -0.15
SNCAP37840 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.09□□□□□ -0.15
SNCAP37840 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SNCAP37840 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNCAP37840 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SNCAP37840 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNCAP37840 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.09□□□□□ -0.15
SNCAP37840 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNCAP37840 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNCAP37840 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SNCAP37840 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SNCAP37840 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNCAP37840 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNCAP37840 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SNCAP37840 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SNCAP37840 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SNCAP37840 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
SNCAP37840 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SNCAP37840 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SNCAP37840 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.08□□□□□ -0.16
SNCAP37840 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.08□□□□□ -0.16
SNCAP37840 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNCAP37840 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNCAP37840 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
SNCAP37840 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNCAP37840 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
SNCAP37840 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.08□□□□□ -0.16
SNCAP37840 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNCAP37840 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
SNCAP37840 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SNCAP37840 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SNCAP37840 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNCAP37840 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.08□□□□□ -0.16
SNCAP37840 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.08□□□□□ -0.16
SNCAP37840 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.08□□□□□ -0.16
SNCAP37840 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.08□□□□□ -0.16
SNCAP37840 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SNCAP37840 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SNCAP37840 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.08□□□□□ -0.16
SNCAP37840 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.08□□□□□ -0.16
SNCAP37840 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.08□□□□□ -0.16
SNCAP37840 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SNCAP37840 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
SNCAP37840 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNCAP37840 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNCAP37840 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SNCAP37840 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNCAP37840 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNCAP37840 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.08□□□□□ -0.16
SNCAP37840 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
SNCAP37840 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SNCAP37840 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNCAP37840 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNCAP37840 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNCAP37840 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNCAP37840 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SNCAP37840 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SNCAP37840 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.08□□□□□ -0.16
SNCAP37840 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SNCAP37840 AL391807.1-203ENST00000604392 2365 ntBASIC14.08□□□□□ -0.16
SNCAP37840 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNCAP37840 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms