Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KRT20P35900 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
KRT20P35900 MYCLP1-201ENST00000372451 1075 ntBASIC16.28■□□□□ 0.2
KRT20P35900 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
KRT20P35900 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
KRT20P35900 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT20P35900 KRT16P4-201ENST00000453883 522 ntBASIC16.28■□□□□ 0.2
KRT20P35900 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.28■□□□□ 0.2
KRT20P35900 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.28■□□□□ 0.2
KRT20P35900 AL591684.3-201ENST00000605187 298 ntBASIC16.28■□□□□ 0.2
KRT20P35900 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.28■□□□□ 0.2
KRT20P35900 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT20P35900 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT20P35900 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
KRT20P35900 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT20P35900 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
KRT20P35900 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT20P35900 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT20P35900 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KRT20P35900 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT20P35900 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT20P35900 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT20P35900 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
KRT20P35900 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT20P35900 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT20P35900 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT20P35900 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KRT20P35900 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT20P35900 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT20P35900 AL162727.3-201ENST00000635661 2787 ntBASIC16.27■□□□□ 0.2
KRT20P35900 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT20P35900 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT20P35900 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT20P35900 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KRT20P35900 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT20P35900 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT20P35900 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.27■□□□□ 0.2
KRT20P35900 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT20P35900 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
KRT20P35900 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
KRT20P35900 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT20P35900 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT20P35900 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT20P35900 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT20P35900 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.27■□□□□ 0.2
KRT20P35900 AC002558.1-201ENST00000488906 803 ntBASIC16.27■□□□□ 0.2
KRT20P35900 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.27■□□□□ 0.2
KRT20P35900 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.27■□□□□ 0.2
KRT20P35900 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.27■□□□□ 0.2
KRT20P35900 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KRT20P35900 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.27■□□□□ 0.2
KRT20P35900 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT20P35900 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KRT20P35900 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
KRT20P35900 FLJ38576-201ENST00000623820 2459 ntBASIC16.27■□□□□ 0.19
KRT20P35900 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
KRT20P35900 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
KRT20P35900 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
KRT20P35900 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
KRT20P35900 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.27■□□□□ 0.19
KRT20P35900 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
KRT20P35900 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.27■□□□□ 0.19
KRT20P35900 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
KRT20P35900 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
KRT20P35900 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
KRT20P35900 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
KRT20P35900 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
KRT20P35900 AC060834.1-201ENST00000443027 2032 ntBASIC16.26■□□□□ 0.19
KRT20P35900 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT20P35900 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRT20P35900 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT20P35900 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
KRT20P35900 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT20P35900 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.26■□□□□ 0.19
KRT20P35900 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRT20P35900 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRT20P35900 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT20P35900 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT20P35900 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT20P35900 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.26■□□□□ 0.19
KRT20P35900 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.26■□□□□ 0.19
KRT20P35900 RCN1P2-201ENST00000398357 915 ntBASIC16.26■□□□□ 0.19
KRT20P35900 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.26■□□□□ 0.19
KRT20P35900 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
KRT20P35900 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.26■□□□□ 0.19
KRT20P35900 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT20P35900 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.26■□□□□ 0.19
KRT20P35900 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.26■□□□□ 0.19
KRT20P35900 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.26■□□□□ 0.19
KRT20P35900 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
KRT20P35900 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.26■□□□□ 0.19
KRT20P35900 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.26■□□□□ 0.19
KRT20P35900 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.26■□□□□ 0.19
KRT20P35900 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRT20P35900 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
KRT20P35900 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
KRT20P35900 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
KRT20P35900 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT20P35900 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
KRT20P35900 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms