Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA6P31267 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA6P31267 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA6P31267 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HOXA6P31267 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA6P31267 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA6P31267 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA6P31267 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA6P31267 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HOXA6P31267 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
HOXA6P31267 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA6P31267 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.65■□□□□ 0.26
HOXA6P31267 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXA6P31267 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
HOXA6P31267 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.65■□□□□ 0.26
HOXA6P31267 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HOXA6P31267 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXA6P31267 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
HOXA6P31267 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.65■□□□□ 0.26
HOXA6P31267 AC090164.3-201ENST00000610780 2143 ntBASIC16.65■□□□□ 0.26
HOXA6P31267 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.65■□□□□ 0.26
HOXA6P31267 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.65■□□□□ 0.26
HOXA6P31267 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA6P31267 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA6P31267 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA6P31267 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA6P31267 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA6P31267 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA6P31267 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA6P31267 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HOXA6P31267 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA6P31267 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HOXA6P31267 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXA6P31267 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
HOXA6P31267 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HOXA6P31267 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
HOXA6P31267 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HOXA6P31267 LINC00896-202ENST00000609602 2128 ntBASIC16.64■□□□□ 0.25
HOXA6P31267 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXA6P31267 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HOXA6P31267 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA6P31267 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA6P31267 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA6P31267 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA6P31267 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA6P31267 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA6P31267 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA6P31267 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA6P31267 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA6P31267 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.64■□□□□ 0.25
HOXA6P31267 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HOXA6P31267 AL512384.1-201ENST00000406683 331 ntBASIC16.64■□□□□ 0.25
HOXA6P31267 AP006294.1-201ENST00000415407 339 ntBASIC16.64■□□□□ 0.25
HOXA6P31267 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HOXA6P31267 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.64■□□□□ 0.25
HOXA6P31267 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA6P31267 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA6P31267 AC011495.1-201ENST00000498085 584 ntBASIC16.64■□□□□ 0.25
HOXA6P31267 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA6P31267 AC098859.1-201ENST00000502915 1238 ntBASIC16.64■□□□□ 0.25
HOXA6P31267 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.64■□□□□ 0.25
HOXA6P31267 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXA6P31267 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.64■□□□□ 0.25
HOXA6P31267 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA6P31267 AC017083.2-201ENST00000608069 979 ntBASIC16.64■□□□□ 0.25
HOXA6P31267 SPTSSB-204ENST00000617024 1292 ntBASIC16.64■□□□□ 0.25
HOXA6P31267 AC004840.1-201ENST00000636359 365 ntBASIC16.64■□□□□ 0.25
HOXA6P31267 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HOXA6P31267 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXA6P31267 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HOXA6P31267 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HOXA6P31267 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HOXA6P31267 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA6P31267 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
HOXA6P31267 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA6P31267 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXA6P31267 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA6P31267 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HOXA6P31267 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.64■□□□□ 0.25
HOXA6P31267 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA6P31267 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
HOXA6P31267 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA6P31267 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA6P31267 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA6P31267 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
HOXA6P31267 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HOXA6P31267 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA6P31267 AC133963.1-201ENST00000504166 1679 ntBASIC16.63■□□□□ 0.25
HOXA6P31267 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA6P31267 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA6P31267 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA6P31267 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA6P31267 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA6P31267 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HOXA6P31267 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA6P31267 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
HOXA6P31267 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.63■□□□□ 0.25
HOXA6P31267 SLC25A6P5-201ENST00000435663 894 ntBASIC16.63■□□□□ 0.25
HOXA6P31267 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXA6P31267 AC093004.1-201ENST00000508850 424 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms