Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5AP20339 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
RAB5AP20339 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.27□□□□□ -0.29
RAB5AP20339 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5AP20339 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5AP20339 AC009102.3-201ENST00000623118 1491 ntBASIC13.27□□□□□ -0.29
RAB5AP20339 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5AP20339 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5AP20339 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5AP20339 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.27□□□□□ -0.29
RAB5AP20339 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.27□□□□□ -0.29
RAB5AP20339 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5AP20339 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5AP20339 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.27□□□□□ -0.29
RAB5AP20339 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
RAB5AP20339 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5AP20339 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5AP20339 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5AP20339 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5AP20339 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.27□□□□□ -0.29
RAB5AP20339 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5AP20339 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.29
RAB5AP20339 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.27□□□□□ -0.29
RAB5AP20339 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB5AP20339 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RAB5AP20339 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RAB5AP20339 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB5AP20339 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
RAB5AP20339 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RAB5AP20339 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB5AP20339 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
RAB5AP20339 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
RAB5AP20339 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5AP20339 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5AP20339 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5AP20339 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RAB5AP20339 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
RAB5AP20339 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5AP20339 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5AP20339 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RAB5AP20339 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB5AP20339 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5AP20339 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.26□□□□□ -0.29
RAB5AP20339 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5AP20339 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5AP20339 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
RAB5AP20339 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5AP20339 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
RAB5AP20339 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RAB5AP20339 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC13.26□□□□□ -0.29
RAB5AP20339 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.26□□□□□ -0.29
RAB5AP20339 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5AP20339 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5AP20339 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.26□□□□□ -0.29
RAB5AP20339 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB5AP20339 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.26□□□□□ -0.29
RAB5AP20339 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.26□□□□□ -0.29
RAB5AP20339 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC13.26□□□□□ -0.29
RAB5AP20339 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5AP20339 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.26□□□□□ -0.29
RAB5AP20339 KRT8P50-201ENST00000562022 1438 ntBASIC13.26□□□□□ -0.29
RAB5AP20339 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB5AP20339 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC13.26□□□□□ -0.29
RAB5AP20339 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5AP20339 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5AP20339 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB5AP20339 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5AP20339 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5AP20339 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5AP20339 AC007191.1-201ENST00000623179 2995 ntBASIC13.26□□□□□ -0.29
RAB5AP20339 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC13.26□□□□□ -0.29
RAB5AP20339 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
RAB5AP20339 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
RAB5AP20339 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5AP20339 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.26□□□□□ -0.29
RAB5AP20339 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5AP20339 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
RAB5AP20339 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5AP20339 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAB5AP20339 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAB5AP20339 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RAB5AP20339 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB5AP20339 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.25□□□□□ -0.29
RAB5AP20339 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RAB5AP20339 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RAB5AP20339 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RAB5AP20339 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
RAB5AP20339 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RAB5AP20339 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB5AP20339 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.25□□□□□ -0.29
RAB5AP20339 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB5AP20339 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC13.25□□□□□ -0.29
RAB5AP20339 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
RAB5AP20339 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RAB5AP20339 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAB5AP20339 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC13.25□□□□□ -0.29
RAB5AP20339 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB5AP20339 ENSA-205ENST00000361532 792 ntTSL 2 BASIC13.25□□□□□ -0.29
RAB5AP20339 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAB5AP20339 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms