Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 AC099343.3-201ENST00000605834 2503 ntBASIC10.57□□□□□ -0.72
PDE6GP18545 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
PDE6GP18545 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
PDE6GP18545 ME2P1-201ENST00000426028 1970 ntBASIC10.57□□□□□ -0.72
PDE6GP18545 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
PDE6GP18545 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
PDE6GP18545 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
PDE6GP18545 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
PDE6GP18545 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
PDE6GP18545 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
PDE6GP18545 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC10.57□□□□□ -0.72
PDE6GP18545 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC10.57□□□□□ -0.72
PDE6GP18545 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC10.57□□□□□ -0.72
PDE6GP18545 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
PDE6GP18545 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC10.57□□□□□ -0.72
PDE6GP18545 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
PDE6GP18545 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
PDE6GP18545 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC10.56□□□□□ -0.72
PDE6GP18545 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
PDE6GP18545 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC10.56□□□□□ -0.72
PDE6GP18545 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC10.56□□□□□ -0.72
PDE6GP18545 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
PDE6GP18545 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
PDE6GP18545 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC10.56□□□□□ -0.72
PDE6GP18545 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC10.56□□□□□ -0.72
PDE6GP18545 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
PDE6GP18545 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
PDE6GP18545 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
PDE6GP18545 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC10.56□□□□□ -0.72
PDE6GP18545 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC10.56□□□□□ -0.72
PDE6GP18545 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 OR2A1-AS1-207ENST00000486094 819 ntBASIC10.56□□□□□ -0.72
PDE6GP18545 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 VPS53-216ENST00000574029 585 ntTSL 4 BASIC10.56□□□□□ -0.72
PDE6GP18545 AC133552.2-202ENST00000575694 574 ntBASIC10.56□□□□□ -0.72
PDE6GP18545 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 BLK-205ENST00000529894 2017 ntTSL 5 BASIC10.56□□□□□ -0.72
PDE6GP18545 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC10.56□□□□□ -0.72
PDE6GP18545 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC10.56□□□□□ -0.72
PDE6GP18545 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC10.56□□□□□ -0.72
PDE6GP18545 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC10.56□□□□□ -0.72
PDE6GP18545 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC10.56□□□□□ -0.72
PDE6GP18545 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
PDE6GP18545 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
PDE6GP18545 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC10.56□□□□□ -0.72
PDE6GP18545 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC10.56□□□□□ -0.72
PDE6GP18545 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
PDE6GP18545 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
PDE6GP18545 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC10.56□□□□□ -0.72
PDE6GP18545 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
PDE6GP18545 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
PDE6GP18545 GRK6P1-201ENST00000400595 1711 ntBASIC10.55□□□□□ -0.72
PDE6GP18545 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
PDE6GP18545 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
PDE6GP18545 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
PDE6GP18545 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC10.55□□□□□ -0.72
PDE6GP18545 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
PDE6GP18545 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
PDE6GP18545 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
PDE6GP18545 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
PDE6GP18545 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC10.55□□□□□ -0.72
PDE6GP18545 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC10.55□□□□□ -0.72
PDE6GP18545 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PDE6GP18545 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
PDE6GP18545 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC10.55□□□□□ -0.72
PDE6GP18545 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
PDE6GP18545 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
PDE6GP18545 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
PDE6GP18545 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PDE6GP18545 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
PDE6GP18545 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms