Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CCL3L1P16619 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL3L1P16619 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL3L1P16619 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL3L1P16619 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.09□□□□□ -0.15
CCL3L1P16619 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL3L1P16619 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CCL3L1P16619 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL3L1P16619 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL3L1P16619 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.09□□□□□ -0.15
CCL3L1P16619 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL3L1P16619 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL3L1P16619 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL3L1P16619 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CCL3L1P16619 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CCL3L1P16619 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.08□□□□□ -0.15
CCL3L1P16619 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CCL3L1P16619 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CCL3L1P16619 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3L1P16619 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.08□□□□□ -0.16
CCL3L1P16619 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3L1P16619 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3L1P16619 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3L1P16619 AP002414.1-201ENST00000391405 1147 ntBASIC14.08□□□□□ -0.16
CCL3L1P16619 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL3L1P16619 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CCL3L1P16619 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
CCL3L1P16619 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.08□□□□□ -0.16
CCL3L1P16619 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.08□□□□□ -0.16
CCL3L1P16619 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL3L1P16619 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3L1P16619 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CCL3L1P16619 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL3L1P16619 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3L1P16619 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CCL3L1P16619 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
CCL3L1P16619 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3L1P16619 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3L1P16619 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3L1P16619 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.08□□□□□ -0.16
CCL3L1P16619 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL3L1P16619 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3L1P16619 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CCL3L1P16619 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CCL3L1P16619 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3L1P16619 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CCL3L1P16619 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3L1P16619 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3L1P16619 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.07□□□□□ -0.16
CCL3L1P16619 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3L1P16619 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
CCL3L1P16619 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3L1P16619 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3L1P16619 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3L1P16619 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3L1P16619 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCL3L1P16619 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3L1P16619 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.07□□□□□ -0.16
CCL3L1P16619 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3L1P16619 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3L1P16619 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3L1P16619 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3L1P16619 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.07□□□□□ -0.16
CCL3L1P16619 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.07□□□□□ -0.16
CCL3L1P16619 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CCL3L1P16619 AC124947.2-201ENST00000547118 1133 ntBASIC14.07□□□□□ -0.16
CCL3L1P16619 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.07□□□□□ -0.16
CCL3L1P16619 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3L1P16619 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.07□□□□□ -0.16
CCL3L1P16619 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3L1P16619 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3L1P16619 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3L1P16619 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CCL3L1P16619 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3L1P16619 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3L1P16619 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CCL3L1P16619 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3L1P16619 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
CCL3L1P16619 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3L1P16619 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCL3L1P16619 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3L1P16619 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3L1P16619 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.07□□□□□ -0.16
CCL3L1P16619 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3L1P16619 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCL3L1P16619 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CCL3L1P16619 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCL3L1P16619 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.07□□□□□ -0.16
CCL3L1P16619 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL3L1P16619 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CCL3L1P16619 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL3L1P16619 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL3L1P16619 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.06□□□□□ -0.16
CCL3L1P16619 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL3L1P16619 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL3L1P16619 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL3L1P16619 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL3L1P16619 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL3L1P16619 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL3L1P16619 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms