Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.91■□□□□ 0.46
PDGFRAP16234 AC006557.2-201ENST00000592985 1240 ntBASIC17.91■□□□□ 0.46
PDGFRAP16234 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
PDGFRAP16234 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PDGFRAP16234 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFRAP16234 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFRAP16234 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFRAP16234 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFRAP16234 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.91■□□□□ 0.46
PDGFRAP16234 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFRAP16234 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFRAP16234 AC006504.4-201ENST00000592118 1568 ntBASIC17.91■□□□□ 0.46
PDGFRAP16234 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFRAP16234 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.91■□□□□ 0.46
PDGFRAP16234 AC243591.1-201ENST00000452967 1364 ntBASIC17.91■□□□□ 0.46
PDGFRAP16234 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PDGFRAP16234 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.9■□□□□ 0.46
PDGFRAP16234 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
PDGFRAP16234 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PDGFRAP16234 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFRAP16234 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFRAP16234 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFRAP16234 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFRAP16234 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFRAP16234 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFRAP16234 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PDGFRAP16234 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFRAP16234 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PDGFRAP16234 RPS2P28-201ENST00000314255 741 ntBASIC17.9■□□□□ 0.46
PDGFRAP16234 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFRAP16234 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.9■□□□□ 0.46
PDGFRAP16234 AP002414.1-201ENST00000391405 1147 ntBASIC17.9■□□□□ 0.46
PDGFRAP16234 AL590627.1-203ENST00000421194 1026 ntBASIC17.9■□□□□ 0.46
PDGFRAP16234 AC093909.1-201ENST00000504731 1122 ntBASIC17.9■□□□□ 0.46
PDGFRAP16234 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFRAP16234 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.9■□□□□ 0.46
PDGFRAP16234 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
PDGFRAP16234 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.9■□□□□ 0.46
PDGFRAP16234 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.9■□□□□ 0.46
PDGFRAP16234 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.9■□□□□ 0.46
PDGFRAP16234 AC120114.3-201ENST00000611923 658 ntBASIC17.9■□□□□ 0.46
PDGFRAP16234 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.9■□□□□ 0.46
PDGFRAP16234 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
PDGFRAP16234 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFRAP16234 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFRAP16234 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFRAP16234 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFRAP16234 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFRAP16234 NKILA-202ENST00000614771 2598 ntBASIC17.89■□□□□ 0.46
PDGFRAP16234 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PDGFRAP16234 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFRAP16234 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFRAP16234 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.89■□□□□ 0.45
PDGFRAP16234 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFRAP16234 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFRAP16234 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFRAP16234 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.89■□□□□ 0.45
PDGFRAP16234 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFRAP16234 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFRAP16234 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFRAP16234 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFRAP16234 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFRAP16234 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFRAP16234 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
PDGFRAP16234 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFRAP16234 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFRAP16234 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PDGFRAP16234 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFRAP16234 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.89■□□□□ 0.45
PDGFRAP16234 AC012640.2-201ENST00000561606 901 ntBASIC17.89■□□□□ 0.45
PDGFRAP16234 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFRAP16234 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFRAP16234 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFRAP16234 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFRAP16234 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFRAP16234 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFRAP16234 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.89■□□□□ 0.45
PDGFRAP16234 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFRAP16234 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFRAP16234 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFRAP16234 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.89■□□□□ 0.45
PDGFRAP16234 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 AC011676.5-201ENST00000624864 2660 ntBASIC17.88■□□□□ 0.45
PDGFRAP16234 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.88■□□□□ 0.45
PDGFRAP16234 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.88■□□□□ 0.45
PDGFRAP16234 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PDGFRAP16234 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PDGFRAP16234 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms