Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
DEFA4P12838 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DEFA4P12838 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEFA4P12838 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DEFA4P12838 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEFA4P12838 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEFA4P12838 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEFA4P12838 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEFA4P12838 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEFA4P12838 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEFA4P12838 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEFA4P12838 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.93□□□□□ -0.18
DEFA4P12838 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DEFA4P12838 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.93□□□□□ -0.18
DEFA4P12838 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.93□□□□□ -0.18
DEFA4P12838 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEFA4P12838 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.93□□□□□ -0.18
DEFA4P12838 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEFA4P12838 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.93□□□□□ -0.18
DEFA4P12838 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DEFA4P12838 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.93□□□□□ -0.18
DEFA4P12838 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.93□□□□□ -0.18
DEFA4P12838 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEFA4P12838 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.93□□□□□ -0.18
DEFA4P12838 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
DEFA4P12838 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC13.93□□□□□ -0.18
DEFA4P12838 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
DEFA4P12838 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13.93□□□□□ -0.18
DEFA4P12838 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEFA4P12838 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEFA4P12838 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.93□□□□□ -0.18
DEFA4P12838 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEFA4P12838 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEFA4P12838 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.93□□□□□ -0.18
DEFA4P12838 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DEFA4P12838 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEFA4P12838 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.92□□□□□ -0.18
DEFA4P12838 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
DEFA4P12838 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.92□□□□□ -0.18
DEFA4P12838 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
DEFA4P12838 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.92□□□□□ -0.18
DEFA4P12838 AL662844.4-201ENST00000606367 2838 ntBASIC13.92□□□□□ -0.18
DEFA4P12838 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
DEFA4P12838 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
DEFA4P12838 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
DEFA4P12838 VENTXP7-201ENST00000475503 772 ntBASIC13.92□□□□□ -0.18
DEFA4P12838 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
DEFA4P12838 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.92□□□□□ -0.18
DEFA4P12838 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.92□□□□□ -0.18
DEFA4P12838 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
DEFA4P12838 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
DEFA4P12838 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.92□□□□□ -0.18
DEFA4P12838 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
DEFA4P12838 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
DEFA4P12838 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA4P12838 PCDHA1-201ENST00000378133 2726 ntBASIC13.92□□□□□ -0.18
DEFA4P12838 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA4P12838 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA4P12838 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.91□□□□□ -0.18
DEFA4P12838 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA4P12838 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA4P12838 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA4P12838 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.91□□□□□ -0.18
DEFA4P12838 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
DEFA4P12838 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA4P12838 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA4P12838 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA4P12838 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.91□□□□□ -0.18
DEFA4P12838 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
DEFA4P12838 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA4P12838 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA4P12838 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms