Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.01■□□□□ 0.79
HLA-DOAP06340 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DOAP06340 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DOAP06340 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.01■□□□□ 0.79
HLA-DOAP06340 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DOAP06340 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.01■□□□□ 0.79
HLA-DOAP06340 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DOAP06340 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.01■□□□□ 0.79
HLA-DOAP06340 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DOAP06340 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DOAP06340 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DOAP06340 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DOAP06340 FRMD8P1-201ENST00000440433 1524 ntBASIC20.01■□□□□ 0.79
HLA-DOAP06340 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DOAP06340 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DOAP06340 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DOAP06340 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DOAP06340 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DOAP06340 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
HLA-DOAP06340 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DOAP06340 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DOAP06340 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-DOAP06340 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20■□□□□ 0.79
HLA-DOAP06340 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20■□□□□ 0.79
HLA-DOAP06340 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20■□□□□ 0.79
HLA-DOAP06340 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-DOAP06340 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20■□□□□ 0.79
HLA-DOAP06340 AL592309.1-201ENST00000443127 649 ntBASIC20■□□□□ 0.79
HLA-DOAP06340 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HLA-DOAP06340 HLA-J-203ENST00000494367 1087 ntBASIC20■□□□□ 0.79
HLA-DOAP06340 AC079140.1-201ENST00000508039 487 ntBASIC20■□□□□ 0.79
HLA-DOAP06340 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20■□□□□ 0.79
HLA-DOAP06340 DUX4L17-201ENST00000557360 1267 ntBASIC20■□□□□ 0.79
HLA-DOAP06340 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20■□□□□ 0.79
HLA-DOAP06340 AC025678.2-201ENST00000562061 970 ntBASIC20■□□□□ 0.79
HLA-DOAP06340 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20■□□□□ 0.79
HLA-DOAP06340 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20■□□□□ 0.79
HLA-DOAP06340 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-DOAP06340 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-DOAP06340 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DOAP06340 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DOAP06340 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DOAP06340 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20■□□□□ 0.79
HLA-DOAP06340 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-DOAP06340 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
HLA-DOAP06340 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-DOAP06340 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DOAP06340 SLC22A20-204ENST00000530038 1673 ntBASIC20■□□□□ 0.79
HLA-DOAP06340 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20■□□□□ 0.79
HLA-DOAP06340 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DOAP06340 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-DOAP06340 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-DOAP06340 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DOAP06340 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
HLA-DOAP06340 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DOAP06340 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.99■□□□□ 0.79
HLA-DOAP06340 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
HLA-DOAP06340 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
HLA-DOAP06340 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
HLA-DOAP06340 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DOAP06340 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.99■□□□□ 0.79
HLA-DOAP06340 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.99■□□□□ 0.79
HLA-DOAP06340 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DOAP06340 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DOAP06340 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DOAP06340 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.99■□□□□ 0.79
HLA-DOAP06340 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.99■□□□□ 0.79
HLA-DOAP06340 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
HLA-DOAP06340 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
HLA-DOAP06340 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
HLA-DOAP06340 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.99■□□□□ 0.79
HLA-DOAP06340 AL031055.1-201ENST00000606362 631 ntBASIC19.99■□□□□ 0.79
HLA-DOAP06340 AC009093.7-201ENST00000623853 1223 ntBASIC19.99■□□□□ 0.79
HLA-DOAP06340 LINC00628-201ENST00000628516 1289 ntBASIC19.99■□□□□ 0.79
HLA-DOAP06340 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DOAP06340 NOC2LP2-201ENST00000407594 1944 ntBASIC19.99■□□□□ 0.79
HLA-DOAP06340 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DOAP06340 KRT8P49-201ENST00000604166 1432 ntBASIC19.99■□□□□ 0.79
HLA-DOAP06340 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HLA-DOAP06340 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DOAP06340 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
HLA-DOAP06340 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HLA-DOAP06340 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DOAP06340 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DOAP06340 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
HLA-DOAP06340 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DOAP06340 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DOAP06340 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HLA-DOAP06340 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DOAP06340 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.98■□□□□ 0.79
HLA-DOAP06340 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DOAP06340 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.98■□□□□ 0.79
HLA-DOAP06340 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.98■□□□□ 0.79
HLA-DOAP06340 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
HLA-DOAP06340 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DOAP06340 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.98■□□□□ 0.79
HLA-DOAP06340 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
HLA-DOAP06340 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DOAP06340 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.98■□□□□ 0.79
HLA-DOAP06340 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms