Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HMGN1P05114 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.49■□□□□ 0.07
HMGN1P05114 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGN1P05114 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HMGN1P05114 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.49■□□□□ 0.07
HMGN1P05114 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGN1P05114 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
HMGN1P05114 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGN1P05114 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGN1P05114 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
HMGN1P05114 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.49■□□□□ 0.07
HMGN1P05114 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.49■□□□□ 0.07
HMGN1P05114 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.49■□□□□ 0.07
HMGN1P05114 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGN1P05114 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HMGN1P05114 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.49■□□□□ 0.07
HMGN1P05114 AC090616.6-201ENST00000582640 721 ntBASIC15.49■□□□□ 0.07
HMGN1P05114 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.49■□□□□ 0.07
HMGN1P05114 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HMGN1P05114 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGN1P05114 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGN1P05114 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
HMGN1P05114 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGN1P05114 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.49■□□□□ 0.07
HMGN1P05114 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGN1P05114 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGN1P05114 AC073508.3-201ENST00000619697 1419 ntBASIC15.49■□□□□ 0.07
HMGN1P05114 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGN1P05114 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGN1P05114 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HMGN1P05114 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGN1P05114 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGN1P05114 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.48■□□□□ 0.07
HMGN1P05114 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGN1P05114 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGN1P05114 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGN1P05114 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGN1P05114 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGN1P05114 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGN1P05114 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.48■□□□□ 0.07
HMGN1P05114 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.48■□□□□ 0.07
HMGN1P05114 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
HMGN1P05114 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HMGN1P05114 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGN1P05114 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGN1P05114 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HMGN1P05114 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGN1P05114 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.48■□□□□ 0.07
HMGN1P05114 AK4P3-201ENST00000418260 669 ntBASIC15.48■□□□□ 0.07
HMGN1P05114 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.48■□□□□ 0.07
HMGN1P05114 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.48■□□□□ 0.07
HMGN1P05114 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.48■□□□□ 0.07
HMGN1P05114 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.48■□□□□ 0.07
HMGN1P05114 AC009533.2-201ENST00000543664 586 ntBASIC15.48■□□□□ 0.07
HMGN1P05114 AL592071.1-201ENST00000611956 408 ntBASIC15.48■□□□□ 0.07
HMGN1P05114 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HMGN1P05114 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.48■□□□□ 0.07
HMGN1P05114 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGN1P05114 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGN1P05114 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.48■□□□□ 0.07
HMGN1P05114 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGN1P05114 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.48■□□□□ 0.07
HMGN1P05114 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.48■□□□□ 0.07
HMGN1P05114 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGN1P05114 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HMGN1P05114 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGN1P05114 AL513523.2-202ENST00000427283 2040 ntBASIC15.48■□□□□ 0.07
HMGN1P05114 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGN1P05114 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGN1P05114 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGN1P05114 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HMGN1P05114 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HMGN1P05114 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGN1P05114 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGN1P05114 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.47■□□□□ 0.07
HMGN1P05114 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HMGN1P05114 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGN1P05114 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
HMGN1P05114 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGN1P05114 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.47■□□□□ 0.07
HMGN1P05114 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
HMGN1P05114 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HMGN1P05114 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGN1P05114 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGN1P05114 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGN1P05114 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
HMGN1P05114 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
HMGN1P05114 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
HMGN1P05114 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
HMGN1P05114 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGN1P05114 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGN1P05114 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGN1P05114 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.47■□□□□ 0.07
HMGN1P05114 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGN1P05114 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HMGN1P05114 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HMGN1P05114 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
HMGN1P05114 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.47■□□□□ 0.07
HMGN1P05114 AC005336.2-201ENST00000593183 939 ntBASIC15.47■□□□□ 0.07
HMGN1P05114 IGHV3-41-201ENST00000613121 348 ntBASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms