Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 AC007950.2-201ENST00000615045 2347 ntBASIC15.39■□□□□ 0.05
HLA-DPB1P04440 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 AC011498.5-201ENST00000592027 486 ntBASIC15.38■□□□□ 0.05
HLA-DPB1P04440 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DPB1P04440 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 TSPY26P-202ENST00000565928 3884 ntBASIC15.37■□□□□ 0.05
HLA-DPB1P04440 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 PCED1CP-201ENST00000419887 785 ntBASIC15.37■□□□□ 0.05
HLA-DPB1P04440 TSPY12P-201ENST00000421279 868 ntBASIC15.37■□□□□ 0.05
HLA-DPB1P04440 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 TSPY22P-201ENST00000427496 604 ntBASIC15.37■□□□□ 0.05
HLA-DPB1P04440 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 AC002558.1-201ENST00000488906 803 ntBASIC15.37■□□□□ 0.05
HLA-DPB1P04440 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 AL390719.2-201ENST00000606993 987 ntBASIC15.37■□□□□ 0.05
HLA-DPB1P04440 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms