Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDRT1O95170 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
CDRT1O95170 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDRT1O95170 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDRT1O95170 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDRT1O95170 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDRT1O95170 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CDRT1O95170 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
CDRT1O95170 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CDRT1O95170 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDRT1O95170 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDRT1O95170 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.27■□□□□ 0.04
CDRT1O95170 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.27■□□□□ 0.04
CDRT1O95170 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDRT1O95170 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.27■□□□□ 0.03
CDRT1O95170 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CDRT1O95170 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.27■□□□□ 0.03
CDRT1O95170 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CDRT1O95170 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CDRT1O95170 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CDRT1O95170 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CDRT1O95170 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
CDRT1O95170 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDRT1O95170 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDRT1O95170 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDRT1O95170 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDRT1O95170 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDRT1O95170 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.27■□□□□ 0.03
CDRT1O95170 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.27■□□□□ 0.03
CDRT1O95170 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDRT1O95170 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDRT1O95170 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.27■□□□□ 0.03
CDRT1O95170 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDRT1O95170 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDRT1O95170 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CDRT1O95170 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.27■□□□□ 0.03
CDRT1O95170 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT1O95170 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.26■□□□□ 0.03
CDRT1O95170 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.26■□□□□ 0.03
CDRT1O95170 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.26■□□□□ 0.03
CDRT1O95170 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.26■□□□□ 0.03
CDRT1O95170 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT1O95170 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT1O95170 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CDRT1O95170 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT1O95170 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CDRT1O95170 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.26■□□□□ 0.03
CDRT1O95170 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.26■□□□□ 0.03
CDRT1O95170 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.26■□□□□ 0.03
CDRT1O95170 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT1O95170 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT1O95170 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT1O95170 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDRT1O95170 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT1O95170 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT1O95170 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDRT1O95170 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.26■□□□□ 0.03
CDRT1O95170 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT1O95170 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.26■□□□□ 0.03
CDRT1O95170 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT1O95170 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.26■□□□□ 0.03
CDRT1O95170 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.26■□□□□ 0.03
CDRT1O95170 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.26■□□□□ 0.03
CDRT1O95170 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT1O95170 AC113404.2-201ENST00000507884 177 ntBASIC15.26■□□□□ 0.03
CDRT1O95170 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.26■□□□□ 0.03
CDRT1O95170 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT1O95170 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT1O95170 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT1O95170 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT1O95170 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.26■□□□□ 0.03
CDRT1O95170 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDRT1O95170 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CDRT1O95170 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.26■□□□□ 0.03
CDRT1O95170 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT1O95170 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.26■□□□□ 0.03
CDRT1O95170 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT1O95170 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDRT1O95170 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT1O95170 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.26■□□□□ 0.03
CDRT1O95170 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT1O95170 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDRT1O95170 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.26■□□□□ 0.03
CDRT1O95170 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT1O95170 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT1O95170 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
CDRT1O95170 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT1O95170 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.25■□□□□ 0.03
CDRT1O95170 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT1O95170 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT1O95170 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CDRT1O95170 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CDRT1O95170 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT1O95170 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.25■□□□□ 0.03
CDRT1O95170 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.25■□□□□ 0.03
CDRT1O95170 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CDRT1O95170 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
CDRT1O95170 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.25■□□□□ 0.03
CDRT1O95170 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CDRT1O95170 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms