Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PLOD3O60568 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PLOD3O60568 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
PLOD3O60568 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PLOD3O60568 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PLOD3O60568 AKR1C7P-201ENST00000305623 895 ntBASIC16.12■□□□□ 0.17
PLOD3O60568 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PLOD3O60568 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PLOD3O60568 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PLOD3O60568 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PLOD3O60568 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.12■□□□□ 0.17
PLOD3O60568 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.12■□□□□ 0.17
PLOD3O60568 FGFR3P6-201ENST00000457012 610 ntBASIC16.12■□□□□ 0.17
PLOD3O60568 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PLOD3O60568 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PLOD3O60568 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PLOD3O60568 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.12■□□□□ 0.17
PLOD3O60568 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.12■□□□□ 0.17
PLOD3O60568 AC008608.2-201ENST00000606089 416 ntBASIC16.12■□□□□ 0.17
PLOD3O60568 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PLOD3O60568 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PLOD3O60568 AC097637.2-201ENST00000624096 1997 ntBASIC16.12■□□□□ 0.17
PLOD3O60568 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PLOD3O60568 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PLOD3O60568 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.12■□□□□ 0.17
PLOD3O60568 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PLOD3O60568 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PLOD3O60568 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PLOD3O60568 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PLOD3O60568 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PLOD3O60568 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PLOD3O60568 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PLOD3O60568 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PLOD3O60568 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PLOD3O60568 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PLOD3O60568 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PLOD3O60568 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PLOD3O60568 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PLOD3O60568 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PLOD3O60568 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PLOD3O60568 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PLOD3O60568 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PLOD3O60568 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PLOD3O60568 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PLOD3O60568 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PLOD3O60568 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PLOD3O60568 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PLOD3O60568 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PLOD3O60568 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PLOD3O60568 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PLOD3O60568 NKILA-202ENST00000614771 2598 ntBASIC16.11■□□□□ 0.17
PLOD3O60568 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PLOD3O60568 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.11■□□□□ 0.17
PLOD3O60568 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.11■□□□□ 0.17
PLOD3O60568 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PLOD3O60568 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PLOD3O60568 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PLOD3O60568 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PLOD3O60568 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PLOD3O60568 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PLOD3O60568 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.11■□□□□ 0.17
PLOD3O60568 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.11■□□□□ 0.17
PLOD3O60568 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.11■□□□□ 0.17
PLOD3O60568 BX005266.1-201ENST00000473402 457 ntBASIC16.11■□□□□ 0.17
PLOD3O60568 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.11■□□□□ 0.17
PLOD3O60568 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.11■□□□□ 0.17
PLOD3O60568 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.11■□□□□ 0.17
PLOD3O60568 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.11■□□□□ 0.17
PLOD3O60568 IFNL4P1-201ENST00000607083 540 ntBASIC16.11■□□□□ 0.17
PLOD3O60568 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PLOD3O60568 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.11■□□□□ 0.17
PLOD3O60568 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PLOD3O60568 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PLOD3O60568 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PLOD3O60568 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.11■□□□□ 0.17
PLOD3O60568 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PLOD3O60568 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PLOD3O60568 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PLOD3O60568 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.11■□□□□ 0.17
PLOD3O60568 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PLOD3O60568 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.11■□□□□ 0.17
PLOD3O60568 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PLOD3O60568 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PLOD3O60568 AC011676.5-201ENST00000624864 2660 ntBASIC16.11■□□□□ 0.17
PLOD3O60568 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PLOD3O60568 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PLOD3O60568 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PLOD3O60568 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PLOD3O60568 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.1■□□□□ 0.17
PLOD3O60568 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PLOD3O60568 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
PLOD3O60568 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PLOD3O60568 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.1■□□□□ 0.17
PLOD3O60568 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PLOD3O60568 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PLOD3O60568 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PLOD3O60568 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PLOD3O60568 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.1■□□□□ 0.17
PLOD3O60568 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PLOD3O60568 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms