Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SMARCA5O60264 AL773604.1-201ENST00000617417 272 ntBASIC21.04■□□□□ 0.96
SMARCA5O60264 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
SMARCA5O60264 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.04■□□□□ 0.96
SMARCA5O60264 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SMARCA5O60264 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCA5O60264 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCA5O60264 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCA5O60264 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCA5O60264 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCA5O60264 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCA5O60264 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.04■□□□□ 0.96
SMARCA5O60264 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SMARCA5O60264 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SMARCA5O60264 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SMARCA5O60264 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCA5O60264 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC21.03■□□□□ 0.96
SMARCA5O60264 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCA5O60264 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SMARCA5O60264 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCA5O60264 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.03■□□□□ 0.96
SMARCA5O60264 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.03■□□□□ 0.96
SMARCA5O60264 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SMARCA5O60264 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.03■□□□□ 0.96
SMARCA5O60264 SLC25A6P2-201ENST00000497974 877 ntBASIC21.03■□□□□ 0.96
SMARCA5O60264 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCA5O60264 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC21.03■□□□□ 0.96
SMARCA5O60264 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC21.03■□□□□ 0.96
SMARCA5O60264 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC21.03■□□□□ 0.96
SMARCA5O60264 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCA5O60264 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCA5O60264 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SMARCA5O60264 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCA5O60264 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCA5O60264 HLA-A-201ENST00000376802 1334 ntBASIC21.03■□□□□ 0.96
SMARCA5O60264 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SMARCA5O60264 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMARCA5O60264 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC21.02■□□□□ 0.96
SMARCA5O60264 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMARCA5O60264 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMARCA5O60264 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC21.02■□□□□ 0.96
SMARCA5O60264 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMARCA5O60264 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC21.02■□□□□ 0.96
SMARCA5O60264 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC21.02■□□□□ 0.96
SMARCA5O60264 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.02■□□□□ 0.96
SMARCA5O60264 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMARCA5O60264 AC087163.2-201ENST00000457299 853 ntBASIC21.02■□□□□ 0.96
SMARCA5O60264 AC136632.2-201ENST00000512891 861 ntBASIC21.02■□□□□ 0.96
SMARCA5O60264 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMARCA5O60264 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.02■□□□□ 0.96
SMARCA5O60264 AC117500.6-201ENST00000624871 588 ntBASIC21.02■□□□□ 0.96
SMARCA5O60264 AL805961.1-202ENST00000641562 540 ntBASIC21.02■□□□□ 0.96
SMARCA5O60264 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.02■□□□□ 0.96
SMARCA5O60264 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC21.02■□□□□ 0.96
SMARCA5O60264 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
SMARCA5O60264 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMARCA5O60264 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
SMARCA5O60264 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SMARCA5O60264 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SMARCA5O60264 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC21.02■□□□□ 0.95
SMARCA5O60264 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SMARCA5O60264 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCA5O60264 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC21.01■□□□□ 0.95
SMARCA5O60264 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.01■□□□□ 0.95
SMARCA5O60264 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCA5O60264 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCA5O60264 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC21.01■□□□□ 0.95
SMARCA5O60264 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCA5O60264 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCA5O60264 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC21.01■□□□□ 0.95
SMARCA5O60264 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.01■□□□□ 0.95
SMARCA5O60264 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCA5O60264 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
SMARCA5O60264 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC21.01■□□□□ 0.95
SMARCA5O60264 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC21.01■□□□□ 0.95
SMARCA5O60264 AC116407.3-201ENST00000623905 1129 ntBASIC21.01■□□□□ 0.95
SMARCA5O60264 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC21.01■□□□□ 0.95
SMARCA5O60264 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCA5O60264 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCA5O60264 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCA5O60264 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCA5O60264 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCA5O60264 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
SMARCA5O60264 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCA5O60264 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCA5O60264 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC21.01■□□□□ 0.95
SMARCA5O60264 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
SMARCA5O60264 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCA5O60264 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC21.01■□□□□ 0.95
SMARCA5O60264 FOS-208ENST00000555686 1496 ntTSL 2 BASIC21.01■□□□□ 0.95
SMARCA5O60264 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
SMARCA5O60264 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
SMARCA5O60264 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCA5O60264 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCA5O60264 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMARCA5O60264 AC002310.6-201ENST00000624451 1377 ntBASIC21■□□□□ 0.95
SMARCA5O60264 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC21■□□□□ 0.95
SMARCA5O60264 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCA5O60264 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC21■□□□□ 0.95
SMARCA5O60264 INIP-202ENST00000374236 874 ntTSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms