Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17■□□□□ 0.31
PHGDHO43175 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PHGDHO43175 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17■□□□□ 0.31
PHGDHO43175 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17■□□□□ 0.31
PHGDHO43175 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17■□□□□ 0.31
PHGDHO43175 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17■□□□□ 0.31
PHGDHO43175 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17■□□□□ 0.31
PHGDHO43175 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PHGDHO43175 AL662844.4-201ENST00000606367 2838 ntBASIC17■□□□□ 0.31
PHGDHO43175 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PHGDHO43175 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17■□□□□ 0.31
PHGDHO43175 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
PHGDHO43175 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17■□□□□ 0.31
PHGDHO43175 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
PHGDHO43175 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17■□□□□ 0.31
PHGDHO43175 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PHGDHO43175 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PHGDHO43175 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17■□□□□ 0.31
PHGDHO43175 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PHGDHO43175 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17■□□□□ 0.31
PHGDHO43175 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17■□□□□ 0.31
PHGDHO43175 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17■□□□□ 0.31
PHGDHO43175 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17■□□□□ 0.31
PHGDHO43175 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17■□□□□ 0.31
PHGDHO43175 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17■□□□□ 0.31
PHGDHO43175 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17■□□□□ 0.31
PHGDHO43175 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PHGDHO43175 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PHGDHO43175 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17■□□□□ 0.31
PHGDHO43175 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PHGDHO43175 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PHGDHO43175 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PHGDHO43175 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17■□□□□ 0.31
PHGDHO43175 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17■□□□□ 0.31
PHGDHO43175 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17■□□□□ 0.31
PHGDHO43175 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17■□□□□ 0.31
PHGDHO43175 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17■□□□□ 0.31
PHGDHO43175 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PHGDHO43175 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PHGDHO43175 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PHGDHO43175 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PHGDHO43175 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.99■□□□□ 0.31
PHGDHO43175 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.99■□□□□ 0.31
PHGDHO43175 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PHGDHO43175 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PHGDHO43175 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PHGDHO43175 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.99■□□□□ 0.31
PHGDHO43175 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PHGDHO43175 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
PHGDHO43175 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.99■□□□□ 0.31
PHGDHO43175 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.99■□□□□ 0.31
PHGDHO43175 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.99■□□□□ 0.31
PHGDHO43175 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PHGDHO43175 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
PHGDHO43175 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PHGDHO43175 SIGLEC30P-201ENST00000455569 941 ntBASIC16.99■□□□□ 0.31
PHGDHO43175 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
PHGDHO43175 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.99■□□□□ 0.31
PHGDHO43175 AC104819.1-201ENST00000504587 486 ntBASIC16.99■□□□□ 0.31
PHGDHO43175 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PHGDHO43175 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PHGDHO43175 NPAP1P7-201ENST00000613027 823 ntBASIC16.99■□□□□ 0.31
PHGDHO43175 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.99■□□□□ 0.31
PHGDHO43175 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.99■□□□□ 0.31
PHGDHO43175 AP000550.4-202ENST00000639755 178 ntBASIC16.99■□□□□ 0.31
PHGDHO43175 AP000867.4-201ENST00000641616 219 ntBASIC16.99■□□□□ 0.31
PHGDHO43175 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PHGDHO43175 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PHGDHO43175 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PHGDHO43175 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PHGDHO43175 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.99■□□□□ 0.31
PHGDHO43175 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PHGDHO43175 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PHGDHO43175 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PHGDHO43175 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PHGDHO43175 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PHGDHO43175 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PHGDHO43175 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PHGDHO43175 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PHGDHO43175 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PHGDHO43175 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.98■□□□□ 0.31
PHGDHO43175 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHGDHO43175 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
PHGDHO43175 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PHGDHO43175 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PHGDHO43175 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.98■□□□□ 0.31
PHGDHO43175 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHGDHO43175 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.98■□□□□ 0.31
PHGDHO43175 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PHGDHO43175 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.98■□□□□ 0.31
PHGDHO43175 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.98■□□□□ 0.31
PHGDHO43175 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.98■□□□□ 0.31
PHGDHO43175 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHGDHO43175 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHGDHO43175 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHGDHO43175 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHGDHO43175 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PHGDHO43175 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHGDHO43175 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHGDHO43175 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms