Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLOCKO15516 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLOCKO15516 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.28■□□□□ 0.2
CLOCKO15516 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
CLOCKO15516 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLOCKO15516 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.28■□□□□ 0.2
CLOCKO15516 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLOCKO15516 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLOCKO15516 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.28■□□□□ 0.2
CLOCKO15516 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.28■□□□□ 0.2
CLOCKO15516 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CLOCKO15516 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.28■□□□□ 0.2
CLOCKO15516 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLOCKO15516 VENTXP5-201ENST00000523979 775 ntBASIC16.28■□□□□ 0.2
CLOCKO15516 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.28■□□□□ 0.2
CLOCKO15516 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLOCKO15516 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.28■□□□□ 0.2
CLOCKO15516 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.28■□□□□ 0.2
CLOCKO15516 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.28■□□□□ 0.2
CLOCKO15516 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.28■□□□□ 0.2
CLOCKO15516 AC093458.2-201ENST00000623150 629 ntBASIC16.28■□□□□ 0.2
CLOCKO15516 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.28■□□□□ 0.2
CLOCKO15516 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.28■□□□□ 0.2
CLOCKO15516 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CLOCKO15516 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.28■□□□□ 0.2
CLOCKO15516 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLOCKO15516 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLOCKO15516 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLOCKO15516 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLOCKO15516 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLOCKO15516 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLOCKO15516 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLOCKO15516 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLOCKO15516 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLOCKO15516 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLOCKO15516 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.28■□□□□ 0.2
CLOCKO15516 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLOCKO15516 AL662844.4-201ENST00000606367 2838 ntBASIC16.27■□□□□ 0.2
CLOCKO15516 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLOCKO15516 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLOCKO15516 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLOCKO15516 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLOCKO15516 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLOCKO15516 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
CLOCKO15516 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.27■□□□□ 0.2
CLOCKO15516 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLOCKO15516 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.27■□□□□ 0.2
CLOCKO15516 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.27■□□□□ 0.2
CLOCKO15516 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.27■□□□□ 0.2
CLOCKO15516 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLOCKO15516 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CLOCKO15516 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.27■□□□□ 0.2
CLOCKO15516 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLOCKO15516 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.27■□□□□ 0.2
CLOCKO15516 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.27■□□□□ 0.2
CLOCKO15516 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CLOCKO15516 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.27■□□□□ 0.2
CLOCKO15516 AL157888.1-201ENST00000631930 593 ntBASIC16.27■□□□□ 0.2
CLOCKO15516 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.27■□□□□ 0.2
CLOCKO15516 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.27■□□□□ 0.2
CLOCKO15516 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.27■□□□□ 0.2
CLOCKO15516 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLOCKO15516 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLOCKO15516 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.27■□□□□ 0.19
CLOCKO15516 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CLOCKO15516 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLOCKO15516 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLOCKO15516 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLOCKO15516 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLOCKO15516 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
CLOCKO15516 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CLOCKO15516 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CLOCKO15516 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CLOCKO15516 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLOCKO15516 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLOCKO15516 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLOCKO15516 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CLOCKO15516 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLOCKO15516 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLOCKO15516 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.26■□□□□ 0.19
CLOCKO15516 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLOCKO15516 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLOCKO15516 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLOCKO15516 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLOCKO15516 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLOCKO15516 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CLOCKO15516 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.26■□□□□ 0.19
CLOCKO15516 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.26■□□□□ 0.19
CLOCKO15516 FAM86EP-206ENST00000510506 987 ntBASIC16.26■□□□□ 0.19
CLOCKO15516 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLOCKO15516 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLOCKO15516 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.26■□□□□ 0.19
CLOCKO15516 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.26■□□□□ 0.19
CLOCKO15516 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CLOCKO15516 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.26■□□□□ 0.19
CLOCKO15516 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLOCKO15516 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.26■□□□□ 0.19
CLOCKO15516 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CLOCKO15516 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLOCKO15516 AC105917.1-201ENST00000506637 2539 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms