Protein–RNA interactions for Protein: O15321

TM9SF1, Transmembrane 9 superfamily member 1, humanhuman

Predictions only

Length 606 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1O15321 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.98■□□□□ 0.31
TM9SF1O15321 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TM9SF1O15321 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF1O15321 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.97■□□□□ 0.31
TM9SF1O15321 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TM9SF1O15321 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF1O15321 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF1O15321 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TM9SF1O15321 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF1O15321 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF1O15321 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF1O15321 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF1O15321 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF1O15321 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.97■□□□□ 0.31
TM9SF1O15321 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.97■□□□□ 0.31
TM9SF1O15321 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TM9SF1O15321 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.97■□□□□ 0.31
TM9SF1O15321 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.97■□□□□ 0.31
TM9SF1O15321 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.97■□□□□ 0.31
TM9SF1O15321 MIR4497-201ENST00000583208 89 ntBASIC16.97■□□□□ 0.31
TM9SF1O15321 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
TM9SF1O15321 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.97■□□□□ 0.31
TM9SF1O15321 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF1O15321 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.97■□□□□ 0.31
TM9SF1O15321 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF1O15321 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF1O15321 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TM9SF1O15321 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF1O15321 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF1O15321 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF1O15321 PAUPAR-201ENST00000630360 2965 ntBASIC16.97■□□□□ 0.31
TM9SF1O15321 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF1O15321 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF1O15321 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.97■□□□□ 0.31
TM9SF1O15321 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TM9SF1O15321 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF1O15321 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF1O15321 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.96■□□□□ 0.31
TM9SF1O15321 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.96■□□□□ 0.31
TM9SF1O15321 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.96■□□□□ 0.31
TM9SF1O15321 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TM9SF1O15321 LINC00895-201ENST00000629028 1637 ntBASIC16.96■□□□□ 0.31
TM9SF1O15321 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.96■□□□□ 0.31
TM9SF1O15321 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF1O15321 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.96■□□□□ 0.31
TM9SF1O15321 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF1O15321 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF1O15321 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF1O15321 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF1O15321 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF1O15321 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF1O15321 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF1O15321 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF1O15321 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.96■□□□□ 0.31
TM9SF1O15321 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF1O15321 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.96■□□□□ 0.31
TM9SF1O15321 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF1O15321 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF1O15321 AL138831.2-201ENST00000606564 490 ntBASIC16.96■□□□□ 0.31
TM9SF1O15321 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF1O15321 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TM9SF1O15321 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TM9SF1O15321 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF1O15321 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
TM9SF1O15321 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.96■□□□□ 0.3
TM9SF1O15321 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.96■□□□□ 0.3
TM9SF1O15321 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TM9SF1O15321 Z83836.1-201ENST00000624605 1642 ntBASIC16.96■□□□□ 0.3
TM9SF1O15321 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TM9SF1O15321 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.96■□□□□ 0.3
TM9SF1O15321 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF1O15321 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF1O15321 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF1O15321 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF1O15321 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF1O15321 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF1O15321 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF1O15321 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TM9SF1O15321 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TM9SF1O15321 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF1O15321 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF1O15321 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF1O15321 AC003669.1-201ENST00000334569 611 ntBASIC16.95■□□□□ 0.3
TM9SF1O15321 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.95■□□□□ 0.3
TM9SF1O15321 HBZP1-201ENST00000354915 429 ntBASIC16.95■□□□□ 0.3
TM9SF1O15321 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.95■□□□□ 0.3
TM9SF1O15321 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF1O15321 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.95■□□□□ 0.3
TM9SF1O15321 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.95■□□□□ 0.3
TM9SF1O15321 AC073912.3-201ENST00000624414 853 ntBASIC16.95■□□□□ 0.3
TM9SF1O15321 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF1O15321 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TM9SF1O15321 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TM9SF1O15321 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF1O15321 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF1O15321 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.95■□□□□ 0.3
TM9SF1O15321 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF1O15321 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF1O15321 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.95■□□□□ 0.3
TM9SF1O15321 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms