Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC11.72□□□□□ -0.53
NDUFA1O15239 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
NDUFA1O15239 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
NDUFA1O15239 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
NDUFA1O15239 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC11.72□□□□□ -0.53
NDUFA1O15239 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 AL662844.4-201ENST00000606367 2838 ntBASIC11.72□□□□□ -0.53
NDUFA1O15239 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 AC132872.4-202ENST00000622924 2756 ntBASIC11.72□□□□□ -0.53
NDUFA1O15239 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
NDUFA1O15239 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
NDUFA1O15239 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 MYB-242ENST00000618728 3545 ntTSL 5 BASIC11.72□□□□□ -0.53
NDUFA1O15239 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
NDUFA1O15239 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
NDUFA1O15239 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
NDUFA1O15239 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC11.72□□□□□ -0.53
NDUFA1O15239 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA1O15239 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA1O15239 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA1O15239 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
NDUFA1O15239 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC11.71□□□□□ -0.53
NDUFA1O15239 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
NDUFA1O15239 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA1O15239 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA1O15239 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA1O15239 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA1O15239 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
NDUFA1O15239 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA1O15239 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC11.71□□□□□ -0.53
NDUFA1O15239 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
NDUFA1O15239 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA1O15239 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA1O15239 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
NDUFA1O15239 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC11.71□□□□□ -0.53
NDUFA1O15239 AC079328.2-201ENST00000561241 3354 ntBASIC11.71□□□□□ -0.53
NDUFA1O15239 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA1O15239 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
NDUFA1O15239 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA1O15239 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA1O15239 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC11.71□□□□□ -0.53
NDUFA1O15239 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA1O15239 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC11.71□□□□□ -0.53
NDUFA1O15239 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC11.71□□□□□ -0.53
NDUFA1O15239 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA1O15239 TK1-204ENST00000590430 683 ntTSL 3 BASIC11.71□□□□□ -0.53
NDUFA1O15239 AL023973.1-201ENST00000624619 620 ntBASIC11.71□□□□□ -0.53
NDUFA1O15239 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA1O15239 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA1O15239 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
NDUFA1O15239 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NDUFA1O15239 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC11.71□□□□□ -0.54
NDUFA1O15239 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
NDUFA1O15239 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NDUFA1O15239 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
NDUFA1O15239 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC11.71□□□□□ -0.54
NDUFA1O15239 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NDUFA1O15239 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
NDUFA1O15239 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NDUFA1O15239 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
NDUFA1O15239 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NDUFA1O15239 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
NDUFA1O15239 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
NDUFA1O15239 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
NDUFA1O15239 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
NDUFA1O15239 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NDUFA1O15239 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
NDUFA1O15239 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NDUFA1O15239 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC11.7□□□□□ -0.54
NDUFA1O15239 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC11.7□□□□□ -0.54
NDUFA1O15239 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC11.7□□□□□ -0.54
NDUFA1O15239 AL391807.1-203ENST00000604392 2365 ntBASIC11.7□□□□□ -0.54
NDUFA1O15239 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
NDUFA1O15239 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC11.7□□□□□ -0.54
NDUFA1O15239 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC11.7□□□□□ -0.54
NDUFA1O15239 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
NDUFA1O15239 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC11.7□□□□□ -0.54
NDUFA1O15239 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC11.7□□□□□ -0.54
NDUFA1O15239 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms