Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN6O15212 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.12■□□□□ 0.33
PFDN6O15212 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN6O15212 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN6O15212 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN6O15212 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN6O15212 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.12■□□□□ 0.33
PFDN6O15212 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN6O15212 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN6O15212 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN6O15212 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN6O15212 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PFDN6O15212 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PFDN6O15212 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN6O15212 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN6O15212 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.12■□□□□ 0.33
PFDN6O15212 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.12■□□□□ 0.33
PFDN6O15212 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.12■□□□□ 0.33
PFDN6O15212 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.12■□□□□ 0.33
PFDN6O15212 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN6O15212 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PFDN6O15212 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.12■□□□□ 0.33
PFDN6O15212 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PFDN6O15212 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN6O15212 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PFDN6O15212 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN6O15212 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN6O15212 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN6O15212 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN6O15212 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.12■□□□□ 0.33
PFDN6O15212 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN6O15212 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
PFDN6O15212 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN6O15212 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN6O15212 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN6O15212 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PFDN6O15212 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PFDN6O15212 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN6O15212 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.12■□□□□ 0.33
PFDN6O15212 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN6O15212 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN6O15212 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PFDN6O15212 AL513477.1-201ENST00000602865 2407 ntBASIC17.11■□□□□ 0.33
PFDN6O15212 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PFDN6O15212 AC148477.5-201ENST00000625164 1645 ntBASIC17.11■□□□□ 0.33
PFDN6O15212 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.11■□□□□ 0.33
PFDN6O15212 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN6O15212 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN6O15212 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.11■□□□□ 0.33
PFDN6O15212 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN6O15212 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.11■□□□□ 0.33
PFDN6O15212 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PFDN6O15212 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN6O15212 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PFDN6O15212 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.11■□□□□ 0.33
PFDN6O15212 SCARNA2-201ENST00000458748 420 ntBASIC17.11■□□□□ 0.33
PFDN6O15212 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.11■□□□□ 0.33
PFDN6O15212 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PFDN6O15212 KRT18P31-201ENST00000506277 1292 ntBASIC17.11■□□□□ 0.33
PFDN6O15212 AP002490.2-201ENST00000524791 560 ntBASIC17.11■□□□□ 0.33
PFDN6O15212 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.11■□□□□ 0.33
PFDN6O15212 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.11■□□□□ 0.33
PFDN6O15212 AL022326.1-202ENST00000641533 845 ntBASIC17.11■□□□□ 0.33
PFDN6O15212 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN6O15212 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PFDN6O15212 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PFDN6O15212 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN6O15212 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN6O15212 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.11■□□□□ 0.33
PFDN6O15212 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.11■□□□□ 0.33
PFDN6O15212 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN6O15212 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN6O15212 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN6O15212 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN6O15212 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN6O15212 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.11■□□□□ 0.33
PFDN6O15212 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PFDN6O15212 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
PFDN6O15212 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PFDN6O15212 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.1■□□□□ 0.33
PFDN6O15212 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PFDN6O15212 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PFDN6O15212 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.1■□□□□ 0.33
PFDN6O15212 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PFDN6O15212 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PFDN6O15212 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.1■□□□□ 0.33
PFDN6O15212 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PFDN6O15212 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PFDN6O15212 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PFDN6O15212 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PFDN6O15212 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.1■□□□□ 0.33
PFDN6O15212 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PFDN6O15212 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PFDN6O15212 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.1■□□□□ 0.33
PFDN6O15212 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.1■□□□□ 0.33
PFDN6O15212 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PFDN6O15212 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.1■□□□□ 0.33
PFDN6O15212 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.1■□□□□ 0.33
PFDN6O15212 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
PFDN6O15212 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms