Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 AC108860.2-201ENST00000562760 2183 ntBASIC20.42■□□□□ 0.86
SEMA3EO15041 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.42■□□□□ 0.86
SEMA3EO15041 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SEMA3EO15041 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SEMA3EO15041 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SEMA3EO15041 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SEMA3EO15041 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SEMA3EO15041 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SEMA3EO15041 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.41■□□□□ 0.86
SEMA3EO15041 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.41■□□□□ 0.86
SEMA3EO15041 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SEMA3EO15041 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SEMA3EO15041 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.41■□□□□ 0.86
SEMA3EO15041 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SEMA3EO15041 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SEMA3EO15041 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.41■□□□□ 0.86
SEMA3EO15041 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.41■□□□□ 0.86
SEMA3EO15041 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SEMA3EO15041 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.41■□□□□ 0.86
SEMA3EO15041 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.41■□□□□ 0.86
SEMA3EO15041 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.41■□□□□ 0.86
SEMA3EO15041 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.41■□□□□ 0.86
SEMA3EO15041 AL592309.1-201ENST00000443127 649 ntBASIC20.41■□□□□ 0.86
SEMA3EO15041 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.41■□□□□ 0.86
SEMA3EO15041 CYMP-203ENST00000474680 1263 ntBASIC20.41■□□□□ 0.86
SEMA3EO15041 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.41■□□□□ 0.86
SEMA3EO15041 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.41■□□□□ 0.86
SEMA3EO15041 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.41■□□□□ 0.86
SEMA3EO15041 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SEMA3EO15041 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SEMA3EO15041 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SEMA3EO15041 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SEMA3EO15041 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SEMA3EO15041 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SEMA3EO15041 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.41■□□□□ 0.86
SEMA3EO15041 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SEMA3EO15041 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SEMA3EO15041 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.4■□□□□ 0.86
SEMA3EO15041 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SEMA3EO15041 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SEMA3EO15041 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SEMA3EO15041 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SEMA3EO15041 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SEMA3EO15041 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SEMA3EO15041 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SEMA3EO15041 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
SEMA3EO15041 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
SEMA3EO15041 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.4■□□□□ 0.86
SEMA3EO15041 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SEMA3EO15041 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.4■□□□□ 0.86
SEMA3EO15041 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.4■□□□□ 0.86
SEMA3EO15041 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SEMA3EO15041 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SEMA3EO15041 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
SEMA3EO15041 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.4■□□□□ 0.86
SEMA3EO15041 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC20.4■□□□□ 0.86
SEMA3EO15041 KRT8P23-201ENST00000560090 1207 ntBASIC20.4■□□□□ 0.86
SEMA3EO15041 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SEMA3EO15041 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.4■□□□□ 0.86
SEMA3EO15041 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SEMA3EO15041 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SEMA3EO15041 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SEMA3EO15041 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
SEMA3EO15041 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SEMA3EO15041 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SEMA3EO15041 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SEMA3EO15041 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
SEMA3EO15041 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
SEMA3EO15041 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.39■□□□□ 0.86
SEMA3EO15041 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SEMA3EO15041 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SEMA3EO15041 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
SEMA3EO15041 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SEMA3EO15041 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SEMA3EO15041 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SEMA3EO15041 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.39■□□□□ 0.85
SEMA3EO15041 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.39■□□□□ 0.85
SEMA3EO15041 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.39■□□□□ 0.85
SEMA3EO15041 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.39■□□□□ 0.85
SEMA3EO15041 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.39■□□□□ 0.85
SEMA3EO15041 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SEMA3EO15041 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.39■□□□□ 0.85
SEMA3EO15041 AL589935.2-201ENST00000616471 1231 ntBASIC20.39■□□□□ 0.85
SEMA3EO15041 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.39■□□□□ 0.85
SEMA3EO15041 AC084121.4-201ENST00000641598 221 ntBASIC20.39■□□□□ 0.85
SEMA3EO15041 AF228730.8-201ENST00000642140 221 ntBASIC20.39■□□□□ 0.85
SEMA3EO15041 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SEMA3EO15041 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SEMA3EO15041 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SEMA3EO15041 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SEMA3EO15041 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SEMA3EO15041 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SEMA3EO15041 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.39■□□□□ 0.85
SEMA3EO15041 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SEMA3EO15041 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.39■□□□□ 0.85
SEMA3EO15041 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SEMA3EO15041 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms