Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.89□□□□□ -0.03
SHISA3A0PJX4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
SHISA3A0PJX4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHISA3A0PJX4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SHISA3A0PJX4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHISA3A0PJX4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHISA3A0PJX4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.89□□□□□ -0.03
SHISA3A0PJX4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHISA3A0PJX4 PKD1P1-201ENST00000458669 6805 ntBASIC14.89□□□□□ -0.03
SHISA3A0PJX4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.89□□□□□ -0.03
SHISA3A0PJX4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHISA3A0PJX4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.89□□□□□ -0.03
SHISA3A0PJX4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHISA3A0PJX4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHISA3A0PJX4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
SHISA3A0PJX4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.89□□□□□ -0.03
SHISA3A0PJX4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHISA3A0PJX4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHISA3A0PJX4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHISA3A0PJX4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHISA3A0PJX4 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.88□□□□□ -0.03
SHISA3A0PJX4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 AC092597.1-201ENST00000487352 616 ntBASIC14.88□□□□□ -0.03
SHISA3A0PJX4 NAPSB-206ENST00000562112 1266 ntBASIC14.88□□□□□ -0.03
SHISA3A0PJX4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 AL138966.2-201ENST00000621997 464 ntBASIC14.88□□□□□ -0.03
SHISA3A0PJX4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 TUBB8P12-201ENST00000308911 1335 ntBASIC14.88□□□□□ -0.03
SHISA3A0PJX4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 TUBB7P-202ENST00000428444 1305 ntBASIC14.88□□□□□ -0.03
SHISA3A0PJX4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 TUBB8P7-204ENST00000567960 1332 ntBASIC14.88□□□□□ -0.03
SHISA3A0PJX4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SHISA3A0PJX4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
SHISA3A0PJX4 GPR32P1-201ENST00000601788 811 ntBASIC14.87□□□□□ -0.03
SHISA3A0PJX4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms