Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 AC023824.1-201ENST00000562945 2975 ntBASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 AL135999.2-201ENST00000622438 1686 ntBASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 AL353692.3-201ENST00000407031 1396 ntBASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 IGHGP-201ENST00000390555 1178 ntBASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 MIR4651-201ENST00000582622 73 ntBASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 AC068418.2-201ENST00000577309 3703 ntBASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRDV1A0A1B0GX56 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 HMGA1P5-201ENST00000412453 271 ntBASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.02■□□□□ -0
TRDV1A0A1B0GX56 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRDV1A0A1B0GX56 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRDV1A0A1B0GX56 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.02□□□□□ -0.01
TRDV1A0A1B0GX56 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
TRDV1A0A1B0GX56 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRDV1A0A1B0GX56 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRDV1A0A1B0GX56 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRDV1A0A1B0GX56 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRDV1A0A1B0GX56 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.02□□□□□ -0.01
TRDV1A0A1B0GX56 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.02□□□□□ -0.01
TRDV1A0A1B0GX56 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.02□□□□□ -0.01
TRDV1A0A1B0GX56 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRDV1A0A1B0GX56 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRDV1A0A1B0GX56 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.02□□□□□ -0.01
TRDV1A0A1B0GX56 AL049757.1-201ENST00000616842 1596 ntBASIC15.02□□□□□ -0.01
TRDV1A0A1B0GX56 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRDV1A0A1B0GX56 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.02□□□□□ -0.01
TRDV1A0A1B0GX56 AL596087.1-201ENST00000400979 1969 ntBASIC15.02□□□□□ -0.01
TRDV1A0A1B0GX56 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TRDV1A0A1B0GX56 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRDV1A0A1B0GX56 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TRDV1A0A1B0GX56 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TRDV1A0A1B0GX56 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms