Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 AP005117.1-201ENST00000584346 1413 ntBASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 GPR89P-201ENST00000407924 1495 ntBASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 AC148477.5-201ENST00000625164 1645 ntBASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 AC132008.2-207ENST00000454517 770 ntBASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 AC092053.1-201ENST00000605787 1936 ntBASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHGA11Q9Y5H2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 DOC2GP-204ENST00000639052 2548 ntBASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 AL121772.3-201ENST00000610840 674 ntBASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA11Q9Y5H2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGA11Q9Y5H2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.58■□□□□ 0.25
PCDHGA11Q9Y5H2 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
PCDHGA11Q9Y5H2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGA11Q9Y5H2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
PCDHGA11Q9Y5H2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.58■□□□□ 0.25
PCDHGA11Q9Y5H2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGA11Q9Y5H2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.58■□□□□ 0.25
PCDHGA11Q9Y5H2 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.58■□□□□ 0.25
PCDHGA11Q9Y5H2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.58■□□□□ 0.25
PCDHGA11Q9Y5H2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.58■□□□□ 0.25
PCDHGA11Q9Y5H2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.58■□□□□ 0.25
PCDHGA11Q9Y5H2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGA11Q9Y5H2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 AC106795.1-205ENST00000512851 1056 ntBASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 AC244517.3-201ENST00000616254 1235 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms