Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 EGFEM1P-202ENST00000431685 1563 ntBASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 AC005052.1-201ENST00000625181 2492 ntBASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 RPS2P55-201ENST00000397318 883 ntBASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCL1Q9Y2P8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14□□□□□ -0.17
RCL1Q9Y2P8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14□□□□□ -0.17
RCL1Q9Y2P8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14□□□□□ -0.17
RCL1Q9Y2P8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RCL1Q9Y2P8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14□□□□□ -0.17
RCL1Q9Y2P8 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 TSPY12P-201ENST00000421279 868 ntBASIC14□□□□□ -0.17
RCL1Q9Y2P8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14□□□□□ -0.17
RCL1Q9Y2P8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14□□□□□ -0.17
RCL1Q9Y2P8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14□□□□□ -0.17
RCL1Q9Y2P8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14□□□□□ -0.17
RCL1Q9Y2P8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14□□□□□ -0.17
RCL1Q9Y2P8 AC026471.5-201ENST00000615068 467 ntBASIC14□□□□□ -0.17
RCL1Q9Y2P8 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14□□□□□ -0.17
RCL1Q9Y2P8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 AC144831.1-201ENST00000573312 2656 ntBASIC14□□□□□ -0.17
RCL1Q9Y2P8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14□□□□□ -0.17
RCL1Q9Y2P8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14□□□□□ -0.17
RCL1Q9Y2P8 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14□□□□□ -0.17
RCL1Q9Y2P8 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14□□□□□ -0.17
RCL1Q9Y2P8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14□□□□□ -0.17
RCL1Q9Y2P8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14□□□□□ -0.17
RCL1Q9Y2P8 ALOX12P2-203ENST00000570921 1945 ntBASIC14□□□□□ -0.17
RCL1Q9Y2P8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms