Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 TSPY7P-201ENST00000431358 1114 ntBASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 KSR1P1-201ENST00000446298 240 ntBASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 CD177P1-201ENST00000606252 935 ntBASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
LRCH1Q9Y2L9 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 AL355355.2-201ENST00000442321 338 ntBASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 MCCD1P1-208ENST00000445732 328 ntBASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 AC026471.5-201ENST00000615068 467 ntBASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRCH1Q9Y2L9 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRCH1Q9Y2L9 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 661.8 ms