Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD9Q9P000 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD9Q9P000 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
COMMD9Q9P000 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
COMMD9Q9P000 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD9Q9P000 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD9Q9P000 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD9Q9P000 TSPY14P-201ENST00000303979 915 ntBASIC14.62□□□□□ -0.07
COMMD9Q9P000 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD9Q9P000 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
COMMD9Q9P000 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.62□□□□□ -0.07
COMMD9Q9P000 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
COMMD9Q9P000 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.62□□□□□ -0.07
COMMD9Q9P000 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
COMMD9Q9P000 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.62□□□□□ -0.07
COMMD9Q9P000 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.62□□□□□ -0.07
COMMD9Q9P000 AL512604.3-201ENST00000569583 964 ntBASIC14.62□□□□□ -0.07
COMMD9Q9P000 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD9Q9P000 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.62□□□□□ -0.07
COMMD9Q9P000 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.62□□□□□ -0.07
COMMD9Q9P000 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
COMMD9Q9P000 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD9Q9P000 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.62□□□□□ -0.07
COMMD9Q9P000 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD9Q9P000 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.62□□□□□ -0.07
COMMD9Q9P000 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
COMMD9Q9P000 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.62□□□□□ -0.07
COMMD9Q9P000 MYO15B-237ENST00000642007 4893 ntBASIC14.62□□□□□ -0.07
COMMD9Q9P000 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD9Q9P000 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD9Q9P000 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD9Q9P000 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD9Q9P000 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD9Q9P000 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
COMMD9Q9P000 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD9Q9P000 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 PAUPAR-201ENST00000630360 2965 ntBASIC14.61□□□□□ -0.07
COMMD9Q9P000 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 AC128688.1-201ENST00000487626 519 ntBASIC14.61□□□□□ -0.07
COMMD9Q9P000 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 AC116353.5-201ENST00000638148 1699 ntBASIC14.61□□□□□ -0.07
COMMD9Q9P000 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
COMMD9Q9P000 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD9Q9P000 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
COMMD9Q9P000 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COMMD9Q9P000 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COMMD9Q9P000 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
COMMD9Q9P000 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COMMD9Q9P000 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COMMD9Q9P000 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COMMD9Q9P000 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
COMMD9Q9P000 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms