Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 TSPY12P-201ENST00000421279 868 ntBASIC16.59■□□□□ 0.25
NDE1Q9NXR1 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 EGFEM1P-202ENST00000431685 1563 ntBASIC16.59■□□□□ 0.25
NDE1Q9NXR1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 AC144831.1-201ENST00000573312 2656 ntBASIC16.59■□□□□ 0.25
NDE1Q9NXR1 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NDE1Q9NXR1 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
NDE1Q9NXR1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NDE1Q9NXR1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.58■□□□□ 0.25
NDE1Q9NXR1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
NDE1Q9NXR1 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.58■□□□□ 0.25
NDE1Q9NXR1 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 ABHD17AP1-201ENST00000358206 933 ntBASIC16.58■□□□□ 0.24
NDE1Q9NXR1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 AC096633.1-201ENST00000422446 749 ntBASIC16.58■□□□□ 0.24
NDE1Q9NXR1 AC009947.2-201ENST00000444014 672 ntBASIC16.58■□□□□ 0.24
NDE1Q9NXR1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.58■□□□□ 0.24
NDE1Q9NXR1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 UNC93B2-201ENST00000285383 730 ntBASIC16.57■□□□□ 0.24
NDE1Q9NXR1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 RPS2P55-201ENST00000397318 883 ntBASIC16.57■□□□□ 0.24
NDE1Q9NXR1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 IGHV3-52-201ENST00000519770 353 ntBASIC16.57■□□□□ 0.24
NDE1Q9NXR1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 C2orf69P3-201ENST00000565542 1120 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms