Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 AC026202.3-201ENST00000600805 1127 ntBASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 AL499627.2-201ENST00000606283 725 ntBASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 AC116351.2-201ENST00000606540 1585 ntBASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 GAK-223ENST00000628912 497 ntTSL 5 BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42SE1Q9NRR8 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 FTO-214ENST00000636218 2227 ntTSL 5 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 AL603832.2-201ENST00000566195 2125 ntBASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC8.66□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms