Protein–RNA interactions for Protein: Q8N7F7

UBL4B, Ubiquitin-like protein 4B, humanhuman

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4BQ8N7F7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
UBL4BQ8N7F7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBL4BQ8N7F7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBL4BQ8N7F7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.01■□□□□ 0.47
UBL4BQ8N7F7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
UBL4BQ8N7F7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
UBL4BQ8N7F7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBL4BQ8N7F7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
UBL4BQ8N7F7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBL4BQ8N7F7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBL4BQ8N7F7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18■□□□□ 0.47
UBL4BQ8N7F7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBL4BQ8N7F7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBL4BQ8N7F7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBL4BQ8N7F7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBL4BQ8N7F7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBL4BQ8N7F7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBL4BQ8N7F7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBL4BQ8N7F7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
UBL4BQ8N7F7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBL4BQ8N7F7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18■□□□□ 0.47
UBL4BQ8N7F7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
UBL4BQ8N7F7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18■□□□□ 0.47
UBL4BQ8N7F7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
UBL4BQ8N7F7 CHCHD2P8-201ENST00000429873 447 ntBASIC18■□□□□ 0.47
UBL4BQ8N7F7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18■□□□□ 0.47
UBL4BQ8N7F7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18■□□□□ 0.47
UBL4BQ8N7F7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18■□□□□ 0.47
UBL4BQ8N7F7 AL121672.3-201ENST00000608644 468 ntBASIC18■□□□□ 0.47
UBL4BQ8N7F7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18■□□□□ 0.47
UBL4BQ8N7F7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBL4BQ8N7F7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBL4BQ8N7F7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBL4BQ8N7F7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18■□□□□ 0.47
UBL4BQ8N7F7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
UBL4BQ8N7F7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBL4BQ8N7F7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBL4BQ8N7F7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18■□□□□ 0.47
UBL4BQ8N7F7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBL4BQ8N7F7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18■□□□□ 0.47
UBL4BQ8N7F7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18■□□□□ 0.47
UBL4BQ8N7F7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
UBL4BQ8N7F7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
UBL4BQ8N7F7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 PCDHB17P-201ENST00000539533 2393 ntBASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4BQ8N7F7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
UBL4BQ8N7F7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.98■□□□□ 0.47
UBL4BQ8N7F7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBL4BQ8N7F7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
UBL4BQ8N7F7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.98■□□□□ 0.47
UBL4BQ8N7F7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.98■□□□□ 0.47
UBL4BQ8N7F7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.98■□□□□ 0.47
UBL4BQ8N7F7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
UBL4BQ8N7F7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBL4BQ8N7F7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBL4BQ8N7F7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBL4BQ8N7F7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBL4BQ8N7F7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.98■□□□□ 0.47
UBL4BQ8N7F7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.98■□□□□ 0.47
UBL4BQ8N7F7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBL4BQ8N7F7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.98■□□□□ 0.47
UBL4BQ8N7F7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBL4BQ8N7F7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.98■□□□□ 0.47
UBL4BQ8N7F7 AC091607.1-201ENST00000490318 1060 ntBASIC17.98■□□□□ 0.47
UBL4BQ8N7F7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.98■□□□□ 0.47
UBL4BQ8N7F7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.98■□□□□ 0.47
UBL4BQ8N7F7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms