Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AL353135.1-201ENST00000606729 504 ntBASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 Z99916.3-201ENST00000623422 1080 ntBASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 AL589182.2-201ENST00000619332 1049 ntBASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 AL590787.1-201ENST00000568856 1315 ntBASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC116Q8IYX3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 AC021087.4-201ENST00000563761 564 ntBASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 AC139887.3-201ENST00000568585 713 ntBASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC116Q8IYX3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms