Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC28Q86X40 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.25■□□□□ 0.03
LRRC28Q86X40 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC28Q86X40 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC28Q86X40 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC28Q86X40 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC28Q86X40 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.25■□□□□ 0.03
LRRC28Q86X40 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC28Q86X40 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRC28Q86X40 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LRRC28Q86X40 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.25■□□□□ 0.03
LRRC28Q86X40 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC28Q86X40 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC28Q86X40 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC28Q86X40 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.25■□□□□ 0.03
LRRC28Q86X40 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC28Q86X40 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LRRC28Q86X40 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LRRC28Q86X40 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC28Q86X40 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC28Q86X40 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC28Q86X40 AL353692.3-201ENST00000407031 1396 ntBASIC15.24■□□□□ 0.03
LRRC28Q86X40 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC28Q86X40 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC28Q86X40 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC28Q86X40 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRC28Q86X40 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.24■□□□□ 0.03
LRRC28Q86X40 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC28Q86X40 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRC28Q86X40 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC28Q86X40 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRC28Q86X40 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC28Q86X40 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LRRC28Q86X40 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRC28Q86X40 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC28Q86X40 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
LRRC28Q86X40 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.24■□□□□ 0.03
LRRC28Q86X40 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC28Q86X40 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC28Q86X40 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRC28Q86X40 HCG4P8-203ENST00000443049 980 ntBASIC15.24■□□□□ 0.03
LRRC28Q86X40 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
LRRC28Q86X40 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LRRC28Q86X40 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.24■□□□□ 0.03
LRRC28Q86X40 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LRRC28Q86X40 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC28Q86X40 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRC28Q86X40 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC28Q86X40 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRC28Q86X40 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC28Q86X40 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC28Q86X40 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LRRC28Q86X40 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
LRRC28Q86X40 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRC28Q86X40 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC28Q86X40 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LRRC28Q86X40 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC28Q86X40 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRC28Q86X40 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LRRC28Q86X40 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRC28Q86X40 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
LRRC28Q86X40 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRC28Q86X40 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC28Q86X40 AC092171.3-201ENST00000610122 2651 ntBASIC15.23■□□□□ 0.03
LRRC28Q86X40 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC28Q86X40 LINC00554-201ENST00000564841 3011 ntBASIC15.23■□□□□ 0.03
LRRC28Q86X40 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC28Q86X40 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC28Q86X40 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LRRC28Q86X40 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRC28Q86X40 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC28Q86X40 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC28Q86X40 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC28Q86X40 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC28Q86X40 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC28Q86X40 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC28Q86X40 AP002383.4-201ENST00000442518 975 ntBASIC15.23■□□□□ 0.03
LRRC28Q86X40 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LRRC28Q86X40 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.23■□□□□ 0.03
LRRC28Q86X40 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRC28Q86X40 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.23■□□□□ 0.03
LRRC28Q86X40 KRT18P56-201ENST00000507275 550 ntBASIC15.23■□□□□ 0.03
LRRC28Q86X40 GUSBP12-201ENST00000513727 720 ntBASIC15.23■□□□□ 0.03
LRRC28Q86X40 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.23■□□□□ 0.03
LRRC28Q86X40 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.23■□□□□ 0.03
LRRC28Q86X40 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.23■□□□□ 0.03
LRRC28Q86X40 AC092329.2-201ENST00000598402 547 ntBASIC15.23■□□□□ 0.03
LRRC28Q86X40 IGHV3-41-201ENST00000613121 348 ntBASIC15.23■□□□□ 0.03
LRRC28Q86X40 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.23■□□□□ 0.03
LRRC28Q86X40 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC28Q86X40 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRC28Q86X40 AC105917.1-201ENST00000506637 2539 ntBASIC15.23■□□□□ 0.03
LRRC28Q86X40 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC28Q86X40 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC28Q86X40 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRC28Q86X40 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC28Q86X40 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
LRRC28Q86X40 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC28Q86X40 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC28Q86X40 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms