Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF20Q5VTR2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF20Q5VTR2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF20Q5VTR2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF20Q5VTR2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF20Q5VTR2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF20Q5VTR2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF20Q5VTR2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF20Q5VTR2 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.39■□□□□ 0.85
RNF20Q5VTR2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
RNF20Q5VTR2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.39■□□□□ 0.85
RNF20Q5VTR2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.39■□□□□ 0.85
RNF20Q5VTR2 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RNF20Q5VTR2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF20Q5VTR2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF20Q5VTR2 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF20Q5VTR2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RNF20Q5VTR2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF20Q5VTR2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF20Q5VTR2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
RNF20Q5VTR2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF20Q5VTR2 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 AC124067.4-201ENST00000519691 2379 ntBASIC20.38■□□□□ 0.85
RNF20Q5VTR2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 AL021920.2-201ENST00000624828 1351 ntBASIC20.38■□□□□ 0.85
RNF20Q5VTR2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.38■□□□□ 0.85
RNF20Q5VTR2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 AF238378.1-201ENST00000526806 358 ntBASIC20.38■□□□□ 0.85
RNF20Q5VTR2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.38■□□□□ 0.85
RNF20Q5VTR2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF20Q5VTR2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF20Q5VTR2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF20Q5VTR2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF20Q5VTR2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RNF20Q5VTR2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF20Q5VTR2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF20Q5VTR2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RNF20Q5VTR2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.37■□□□□ 0.85
RNF20Q5VTR2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF20Q5VTR2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.37■□□□□ 0.85
RNF20Q5VTR2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RNF20Q5VTR2 AGGF1P2-201ENST00000426656 2106 ntBASIC20.37■□□□□ 0.85
RNF20Q5VTR2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF20Q5VTR2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF20Q5VTR2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.37■□□□□ 0.85
RNF20Q5VTR2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF20Q5VTR2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF20Q5VTR2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF20Q5VTR2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RNF20Q5VTR2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF20Q5VTR2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF20Q5VTR2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 AC243591.1-201ENST00000452967 1364 ntBASIC20.36■□□□□ 0.85
RNF20Q5VTR2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms