Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RPL39P62891 EGLN1P1-201ENST00000531623 762 ntBASIC12.12□□□□□ -0.47
RPL39P62891 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC12.12□□□□□ -0.47
RPL39P62891 AL512604.3-201ENST00000569583 964 ntBASIC12.12□□□□□ -0.47
RPL39P62891 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
RPL39P62891 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC12.12□□□□□ -0.47
RPL39P62891 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RPL39P62891 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.12□□□□□ -0.47
RPL39P62891 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RPL39P62891 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.12□□□□□ -0.47
RPL39P62891 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC12.12□□□□□ -0.47
RPL39P62891 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RPL39P62891 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
RPL39P62891 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.12□□□□□ -0.47
RPL39P62891 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RPL39P62891 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RPL39P62891 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
RPL39P62891 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RPL39P62891 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
RPL39P62891 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RPL39P62891 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
RPL39P62891 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.12□□□□□ -0.47
RPL39P62891 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC12.11□□□□□ -0.47
RPL39P62891 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC12.11□□□□□ -0.47
RPL39P62891 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC12.11□□□□□ -0.47
RPL39P62891 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC12.11□□□□□ -0.47
RPL39P62891 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
RPL39P62891 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
RPL39P62891 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
RPL39P62891 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
RPL39P62891 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC12.11□□□□□ -0.47
RPL39P62891 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC12.11□□□□□ -0.47
RPL39P62891 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC12.11□□□□□ -0.47
RPL39P62891 EGFEM1P-202ENST00000431685 1563 ntBASIC12.11□□□□□ -0.47
RPL39P62891 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC12.11□□□□□ -0.47
RPL39P62891 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
RPL39P62891 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC12.11□□□□□ -0.47
RPL39P62891 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC12.11□□□□□ -0.47
RPL39P62891 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
RPL39P62891 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC12.11□□□□□ -0.47
RPL39P62891 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC12.11□□□□□ -0.47
RPL39P62891 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC12.11□□□□□ -0.47
RPL39P62891 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
RPL39P62891 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC12.11□□□□□ -0.47
RPL39P62891 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC12.11□□□□□ -0.47
RPL39P62891 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
RPL39P62891 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 AL513477.1-201ENST00000602865 2407 ntBASIC12.11□□□□□ -0.47
RPL39P62891 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
RPL39P62891 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 ALOX12P2-203ENST00000570921 1945 ntBASIC12.11□□□□□ -0.47
RPL39P62891 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.11□□□□□ -0.47
RPL39P62891 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
RPL39P62891 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
RPL39P62891 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
RPL39P62891 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPL39P62891 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RPL39P62891 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
RPL39P62891 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RPL39P62891 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.1□□□□□ -0.47
RPL39P62891 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RPL39P62891 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC12.1□□□□□ -0.47
RPL39P62891 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
RPL39P62891 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
RPL39P62891 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC12.1□□□□□ -0.47
RPL39P62891 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RPL39P62891 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC12.1□□□□□ -0.47
RPL39P62891 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RPL39P62891 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
RPL39P62891 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
RPL39P62891 DBET-201ENST00000630918 3363 ntBASIC12.1□□□□□ -0.47
RPL39P62891 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RPL39P62891 PRORSD1P-201ENST00000295112 541 ntBASIC12.1□□□□□ -0.47
RPL39P62891 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RPL39P62891 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
RPL39P62891 AC096633.1-201ENST00000422446 749 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms