Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.97□□□□□ -0.17
SPCS3P61009 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC13.97□□□□□ -0.17
SPCS3P61009 AL441883.1-201ENST00000566170 1045 ntBASIC13.97□□□□□ -0.17
SPCS3P61009 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.97□□□□□ -0.17
SPCS3P61009 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.97□□□□□ -0.17
SPCS3P61009 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.97□□□□□ -0.17
SPCS3P61009 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.97□□□□□ -0.17
SPCS3P61009 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SPCS3P61009 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.97□□□□□ -0.17
SPCS3P61009 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.97□□□□□ -0.17
SPCS3P61009 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.97□□□□□ -0.17
SPCS3P61009 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.97□□□□□ -0.17
SPCS3P61009 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.97□□□□□ -0.17
SPCS3P61009 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SPCS3P61009 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.97□□□□□ -0.17
SPCS3P61009 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SPCS3P61009 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS3P61009 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS3P61009 AL603756.1-201ENST00000606511 2163 ntBASIC13.96□□□□□ -0.17
SPCS3P61009 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS3P61009 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.96□□□□□ -0.17
SPCS3P61009 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS3P61009 AC092053.1-201ENST00000605787 1936 ntBASIC13.96□□□□□ -0.17
SPCS3P61009 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.96□□□□□ -0.17
SPCS3P61009 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS3P61009 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS3P61009 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS3P61009 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS3P61009 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS3P61009 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS3P61009 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS3P61009 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SPCS3P61009 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS3P61009 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS3P61009 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
SPCS3P61009 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS3P61009 SPDYE15P-201ENST00000424157 909 ntBASIC13.96□□□□□ -0.17
SPCS3P61009 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS3P61009 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
SPCS3P61009 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.96□□□□□ -0.17
SPCS3P61009 AC145285.6-201ENST00000604632 637 ntBASIC13.96□□□□□ -0.17
SPCS3P61009 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS3P61009 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS3P61009 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SPCS3P61009 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS3P61009 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS3P61009 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.96□□□□□ -0.17
SPCS3P61009 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SPCS3P61009 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.96□□□□□ -0.18
SPCS3P61009 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SPCS3P61009 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
SPCS3P61009 AC010460.3-201ENST00000511359 1579 ntBASIC13.96□□□□□ -0.18
SPCS3P61009 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SPCS3P61009 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.96□□□□□ -0.18
SPCS3P61009 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SPCS3P61009 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.96□□□□□ -0.18
SPCS3P61009 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.95□□□□□ -0.18
SPCS3P61009 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS3P61009 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS3P61009 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS3P61009 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS3P61009 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS3P61009 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS3P61009 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS3P61009 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS3P61009 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.95□□□□□ -0.18
SPCS3P61009 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS3P61009 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.95□□□□□ -0.18
SPCS3P61009 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SPCS3P61009 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.95□□□□□ -0.18
SPCS3P61009 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS3P61009 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS3P61009 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SPCS3P61009 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.95□□□□□ -0.18
SPCS3P61009 SLC25A3P1-201ENST00000443844 931 ntBASIC13.95□□□□□ -0.18
SPCS3P61009 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS3P61009 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
SPCS3P61009 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS3P61009 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS3P61009 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS3P61009 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS3P61009 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS3P61009 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.95□□□□□ -0.18
SPCS3P61009 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms