Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CMC4P56277 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CMC4P56277 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC12.71□□□□□ -0.37
CMC4P56277 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.71□□□□□ -0.37
CMC4P56277 RNA5SP415-201ENST00000517246 115 ntBASIC12.71□□□□□ -0.37
CMC4P56277 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.71□□□□□ -0.37
CMC4P56277 UNC93B6-202ENST00000528242 690 ntBASIC12.71□□□□□ -0.37
CMC4P56277 AC012640.2-201ENST00000561606 901 ntBASIC12.71□□□□□ -0.37
CMC4P56277 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.71□□□□□ -0.37
CMC4P56277 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.71□□□□□ -0.37
CMC4P56277 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.71□□□□□ -0.37
CMC4P56277 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CMC4P56277 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.71□□□□□ -0.37
CMC4P56277 MIR7706-201ENST00000613747 67 ntBASIC12.71□□□□□ -0.37
CMC4P56277 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.71□□□□□ -0.37
CMC4P56277 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CMC4P56277 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CMC4P56277 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
CMC4P56277 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC12.71□□□□□ -0.37
CMC4P56277 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
CMC4P56277 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC12.71□□□□□ -0.37
CMC4P56277 CROCCP2-202ENST00000412962 2773 ntBASIC12.71□□□□□ -0.38
CMC4P56277 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC12.71□□□□□ -0.38
CMC4P56277 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CMC4P56277 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC12.71□□□□□ -0.38
CMC4P56277 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
CMC4P56277 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CMC4P56277 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.71□□□□□ -0.38
CMC4P56277 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CMC4P56277 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.71□□□□□ -0.38
CMC4P56277 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.71□□□□□ -0.38
CMC4P56277 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CMC4P56277 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CMC4P56277 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CMC4P56277 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CMC4P56277 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CMC4P56277 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CMC4P56277 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CMC4P56277 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC12.7□□□□□ -0.38
CMC4P56277 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC12.7□□□□□ -0.38
CMC4P56277 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CMC4P56277 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CMC4P56277 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CMC4P56277 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CMC4P56277 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CMC4P56277 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CMC4P56277 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CMC4P56277 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.7□□□□□ -0.38
CMC4P56277 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CMC4P56277 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CMC4P56277 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC12.7□□□□□ -0.38
CMC4P56277 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.7□□□□□ -0.38
CMC4P56277 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.7□□□□□ -0.38
CMC4P56277 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
CMC4P56277 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CMC4P56277 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.7□□□□□ -0.38
CMC4P56277 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.7□□□□□ -0.38
CMC4P56277 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CMC4P56277 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.7□□□□□ -0.38
CMC4P56277 AC005412.3-201ENST00000580309 715 ntBASIC12.7□□□□□ -0.38
CMC4P56277 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.7□□□□□ -0.38
CMC4P56277 AC117500.6-201ENST00000624871 588 ntBASIC12.7□□□□□ -0.38
CMC4P56277 AC007064.4-201ENST00000637740 555 ntBASIC12.7□□□□□ -0.38
CMC4P56277 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC12.7□□□□□ -0.38
CMC4P56277 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.7□□□□□ -0.38
CMC4P56277 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.7□□□□□ -0.38
CMC4P56277 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CMC4P56277 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CMC4P56277 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CMC4P56277 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CMC4P56277 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.7□□□□□ -0.38
CMC4P56277 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC12.7□□□□□ -0.38
CMC4P56277 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
CMC4P56277 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
CMC4P56277 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CMC4P56277 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CMC4P56277 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
CMC4P56277 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CMC4P56277 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.69□□□□□ -0.38
CMC4P56277 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.69□□□□□ -0.38
CMC4P56277 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.69□□□□□ -0.38
CMC4P56277 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CMC4P56277 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC12.69□□□□□ -0.38
CMC4P56277 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CMC4P56277 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.69□□□□□ -0.38
CMC4P56277 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms