Protein–RNA interactions for Protein: P55809

OXCT1, Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OXCT1P55809 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
OXCT1P55809 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.59■□□□□ 0.41
OXCT1P55809 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
OXCT1P55809 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
OXCT1P55809 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
OXCT1P55809 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
OXCT1P55809 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
OXCT1P55809 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
OXCT1P55809 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
OXCT1P55809 AL023806.1-201ENST00000603994 1649 ntBASIC17.58■□□□□ 0.41
OXCT1P55809 OR6D1P-203ENST00000641209 4860 ntBASIC17.58■□□□□ 0.41
OXCT1P55809 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
OXCT1P55809 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
OXCT1P55809 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
OXCT1P55809 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
OXCT1P55809 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
OXCT1P55809 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.58■□□□□ 0.4
OXCT1P55809 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.58■□□□□ 0.4
OXCT1P55809 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
OXCT1P55809 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.58■□□□□ 0.4
OXCT1P55809 AL671883.3-201ENST00000603274 991 ntBASIC17.58■□□□□ 0.4
OXCT1P55809 AC004790.2-201ENST00000623588 572 ntBASIC17.58■□□□□ 0.4
OXCT1P55809 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.58■□□□□ 0.4
OXCT1P55809 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.58■□□□□ 0.4
OXCT1P55809 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.58■□□□□ 0.4
OXCT1P55809 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
OXCT1P55809 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.58■□□□□ 0.4
OXCT1P55809 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
OXCT1P55809 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
OXCT1P55809 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
OXCT1P55809 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
OXCT1P55809 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
OXCT1P55809 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
OXCT1P55809 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
OXCT1P55809 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
OXCT1P55809 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.57■□□□□ 0.4
OXCT1P55809 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
OXCT1P55809 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
OXCT1P55809 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
OXCT1P55809 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
OXCT1P55809 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
OXCT1P55809 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
OXCT1P55809 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
OXCT1P55809 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
OXCT1P55809 PAWRP1-201ENST00000451083 565 ntBASIC17.57■□□□□ 0.4
OXCT1P55809 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.57■□□□□ 0.4
OXCT1P55809 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
OXCT1P55809 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.57■□□□□ 0.4
OXCT1P55809 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
OXCT1P55809 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
OXCT1P55809 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
OXCT1P55809 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
OXCT1P55809 EGFEM1P-202ENST00000431685 1563 ntBASIC17.57■□□□□ 0.4
OXCT1P55809 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.57■□□□□ 0.4
OXCT1P55809 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
OXCT1P55809 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
OXCT1P55809 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.56■□□□□ 0.4
OXCT1P55809 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
OXCT1P55809 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
OXCT1P55809 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
OXCT1P55809 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
OXCT1P55809 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
OXCT1P55809 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
OXCT1P55809 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
OXCT1P55809 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
OXCT1P55809 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
OXCT1P55809 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
OXCT1P55809 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
OXCT1P55809 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
OXCT1P55809 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
OXCT1P55809 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
OXCT1P55809 SLC25A1P3-201ENST00000395415 828 ntBASIC17.56■□□□□ 0.4
OXCT1P55809 MIR940-201ENST00000401276 94 ntBASIC17.56■□□□□ 0.4
OXCT1P55809 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
OXCT1P55809 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.56■□□□□ 0.4
OXCT1P55809 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.56■□□□□ 0.4
OXCT1P55809 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.56■□□□□ 0.4
OXCT1P55809 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.56■□□□□ 0.4
OXCT1P55809 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.56■□□□□ 0.4
OXCT1P55809 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
OXCT1P55809 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
OXCT1P55809 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.56■□□□□ 0.4
OXCT1P55809 AC064836.3-201ENST00000607928 673 ntBASIC17.56■□□□□ 0.4
OXCT1P55809 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.56■□□□□ 0.4
OXCT1P55809 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
OXCT1P55809 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
OXCT1P55809 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
OXCT1P55809 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.56■□□□□ 0.4
OXCT1P55809 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.56■□□□□ 0.4
OXCT1P55809 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
OXCT1P55809 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
OXCT1P55809 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
OXCT1P55809 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
OXCT1P55809 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
OXCT1P55809 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
OXCT1P55809 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
OXCT1P55809 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.56■□□□□ 0.4
OXCT1P55809 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
OXCT1P55809 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OXCT1P55809 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms