Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PMS1P54277 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PMS1P54277 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PMS1P54277 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PMS1P54277 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.78■□□□□ 0.6
PMS1P54277 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PMS1P54277 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PMS1P54277 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.78■□□□□ 0.6
PMS1P54277 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.78■□□□□ 0.6
PMS1P54277 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PMS1P54277 SART3-203ENST00000546611 1184 ntBASIC18.78■□□□□ 0.6
PMS1P54277 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.78■□□□□ 0.6
PMS1P54277 MTDHP3-201ENST00000594186 672 ntBASIC18.78■□□□□ 0.6
PMS1P54277 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.78■□□□□ 0.6
PMS1P54277 AL022326.1-202ENST00000641533 845 ntBASIC18.78■□□□□ 0.6
PMS1P54277 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PMS1P54277 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PMS1P54277 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.78■□□□□ 0.6
PMS1P54277 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PMS1P54277 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PMS1P54277 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.78■□□□□ 0.6
PMS1P54277 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.78■□□□□ 0.6
PMS1P54277 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PMS1P54277 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.78■□□□□ 0.6
PMS1P54277 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.78■□□□□ 0.6
PMS1P54277 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PMS1P54277 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.77■□□□□ 0.6
PMS1P54277 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.77■□□□□ 0.6
PMS1P54277 AL391256.1-201ENST00000443260 1855 ntBASIC18.77■□□□□ 0.6
PMS1P54277 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PMS1P54277 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PMS1P54277 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PMS1P54277 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PMS1P54277 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PMS1P54277 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
PMS1P54277 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PMS1P54277 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PMS1P54277 AL356309.3-201ENST00000624132 1934 ntBASIC18.77■□□□□ 0.6
PMS1P54277 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.77■□□□□ 0.6
PMS1P54277 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PMS1P54277 AKR1C7P-201ENST00000305623 895 ntBASIC18.77■□□□□ 0.6
PMS1P54277 FGFR3P6-201ENST00000457012 610 ntBASIC18.77■□□□□ 0.6
PMS1P54277 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PMS1P54277 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.77■□□□□ 0.6
PMS1P54277 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PMS1P54277 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.77■□□□□ 0.6
PMS1P54277 AC012313.10-201ENST00000623509 926 ntBASIC18.77■□□□□ 0.6
PMS1P54277 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.77■□□□□ 0.6
PMS1P54277 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PMS1P54277 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
PMS1P54277 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
PMS1P54277 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PMS1P54277 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PMS1P54277 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
PMS1P54277 AC243591.1-201ENST00000452967 1364 ntBASIC18.77■□□□□ 0.6
PMS1P54277 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
PMS1P54277 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.77■□□□□ 0.59
PMS1P54277 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.59
PMS1P54277 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
PMS1P54277 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.76■□□□□ 0.59
PMS1P54277 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.76■□□□□ 0.59
PMS1P54277 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PMS1P54277 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PMS1P54277 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PMS1P54277 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
PMS1P54277 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PMS1P54277 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PMS1P54277 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.76■□□□□ 0.59
PMS1P54277 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PMS1P54277 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PMS1P54277 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PMS1P54277 RBM17P3-201ENST00000417687 1192 ntBASIC18.76■□□□□ 0.59
PMS1P54277 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.76■□□□□ 0.59
PMS1P54277 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.76■□□□□ 0.59
PMS1P54277 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.76■□□□□ 0.59
PMS1P54277 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.76■□□□□ 0.59
PMS1P54277 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.76■□□□□ 0.59
PMS1P54277 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.76■□□□□ 0.59
PMS1P54277 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.76■□□□□ 0.59
PMS1P54277 AL355877.3-201ENST00000622820 899 ntBASIC18.76■□□□□ 0.59
PMS1P54277 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PMS1P54277 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PMS1P54277 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PMS1P54277 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PMS1P54277 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PMS1P54277 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.76■□□□□ 0.59
PMS1P54277 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PMS1P54277 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PMS1P54277 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PMS1P54277 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PMS1P54277 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PMS1P54277 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PMS1P54277 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
PMS1P54277 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PMS1P54277 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
PMS1P54277 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.75■□□□□ 0.59
PMS1P54277 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.75■□□□□ 0.59
PMS1P54277 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PMS1P54277 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PMS1P54277 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms