Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX2-5P52952 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX2-5P52952 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.54□□□□□ -0.08
NKX2-5P52952 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.54□□□□□ -0.08
NKX2-5P52952 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX2-5P52952 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NKX2-5P52952 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX2-5P52952 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX2-5P52952 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NKX2-5P52952 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.54□□□□□ -0.08
NKX2-5P52952 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX2-5P52952 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX2-5P52952 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NKX2-5P52952 AL390719.1-204ENST00000412397 1219 ntBASIC14.54□□□□□ -0.08
NKX2-5P52952 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NKX2-5P52952 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC14.54□□□□□ -0.08
NKX2-5P52952 GRAMD4P4-201ENST00000613563 1115 ntBASIC14.54□□□□□ -0.08
NKX2-5P52952 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.54□□□□□ -0.08
NKX2-5P52952 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX2-5P52952 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NKX2-5P52952 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX2-5P52952 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.54□□□□□ -0.08
NKX2-5P52952 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX2-5P52952 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NKX2-5P52952 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.54□□□□□ -0.08
NKX2-5P52952 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX2-5P52952 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.54□□□□□ -0.08
NKX2-5P52952 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NKX2-5P52952 LINC00552-201ENST00000625151 2579 ntBASIC14.54□□□□□ -0.08
NKX2-5P52952 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.54□□□□□ -0.08
NKX2-5P52952 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.54□□□□□ -0.08
NKX2-5P52952 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NKX2-5P52952 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX2-5P52952 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NKX2-5P52952 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NKX2-5P52952 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX2-5P52952 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX2-5P52952 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX2-5P52952 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX2-5P52952 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NKX2-5P52952 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX2-5P52952 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NKX2-5P52952 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.53□□□□□ -0.08
NKX2-5P52952 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.53□□□□□ -0.08
NKX2-5P52952 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.53□□□□□ -0.08
NKX2-5P52952 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.53□□□□□ -0.08
NKX2-5P52952 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX2-5P52952 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC14.53□□□□□ -0.08
NKX2-5P52952 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX2-5P52952 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
NKX2-5P52952 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX2-5P52952 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX2-5P52952 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC14.53□□□□□ -0.08
NKX2-5P52952 PBX2P1-201ENST00000493219 1291 ntBASIC14.53□□□□□ -0.08
NKX2-5P52952 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC14.53□□□□□ -0.08
NKX2-5P52952 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC14.53□□□□□ -0.08
NKX2-5P52952 HLA-A-209ENST00000638375 975 ntBASIC14.53□□□□□ -0.08
NKX2-5P52952 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
NKX2-5P52952 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
NKX2-5P52952 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NKX2-5P52952 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX2-5P52952 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX2-5P52952 COL6A4P2-202ENST00000504443 2753 ntBASIC14.53□□□□□ -0.08
NKX2-5P52952 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX2-5P52952 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
NKX2-5P52952 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX2-5P52952 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
NKX2-5P52952 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.53□□□□□ -0.08
NKX2-5P52952 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX2-5P52952 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.53□□□□□ -0.08
NKX2-5P52952 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX2-5P52952 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
NKX2-5P52952 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
NKX2-5P52952 ME2P1-201ENST00000426028 1970 ntBASIC14.53□□□□□ -0.08
NKX2-5P52952 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-5P52952 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-5P52952 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.52□□□□□ -0.08
NKX2-5P52952 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-5P52952 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-5P52952 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.52□□□□□ -0.08
NKX2-5P52952 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.52□□□□□ -0.08
NKX2-5P52952 AL109659.2-201ENST00000606809 1674 ntBASIC14.52□□□□□ -0.08
NKX2-5P52952 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
NKX2-5P52952 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.52□□□□□ -0.08
NKX2-5P52952 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-5P52952 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-5P52952 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
NKX2-5P52952 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-5P52952 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-5P52952 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-5P52952 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
NKX2-5P52952 AL163051.1-201ENST00000569214 1512 ntBASIC14.52□□□□□ -0.08
NKX2-5P52952 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-5P52952 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-5P52952 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC14.52□□□□□ -0.08
NKX2-5P52952 LINC01311-201ENST00000565162 1445 ntBASIC14.52□□□□□ -0.08
NKX2-5P52952 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-5P52952 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-5P52952 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
NKX2-5P52952 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms