Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CSNK1EP49674 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CSNK1EP49674 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1EP49674 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1EP49674 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CSNK1EP49674 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1EP49674 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1EP49674 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1EP49674 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.66■□□□□ 0.26
CSNK1EP49674 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1EP49674 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
CSNK1EP49674 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.66■□□□□ 0.26
CSNK1EP49674 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1EP49674 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1EP49674 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1EP49674 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1EP49674 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1EP49674 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1EP49674 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.66■□□□□ 0.26
CSNK1EP49674 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.66■□□□□ 0.26
CSNK1EP49674 AC015922.1-201ENST00000421102 1152 ntBASIC16.66■□□□□ 0.26
CSNK1EP49674 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.66■□□□□ 0.26
CSNK1EP49674 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1EP49674 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.66■□□□□ 0.26
CSNK1EP49674 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.66■□□□□ 0.26
CSNK1EP49674 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.66■□□□□ 0.26
CSNK1EP49674 IGHV3-42-201ENST00000520410 361 ntBASIC16.66■□□□□ 0.26
CSNK1EP49674 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.66■□□□□ 0.26
CSNK1EP49674 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.66■□□□□ 0.26
CSNK1EP49674 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1EP49674 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.66■□□□□ 0.26
CSNK1EP49674 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CSNK1EP49674 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.66■□□□□ 0.26
CSNK1EP49674 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1EP49674 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1EP49674 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1EP49674 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1EP49674 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.66■□□□□ 0.26
CSNK1EP49674 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1EP49674 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.65■□□□□ 0.26
CSNK1EP49674 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1EP49674 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1EP49674 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1EP49674 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1EP49674 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1EP49674 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1EP49674 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1EP49674 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.65■□□□□ 0.26
CSNK1EP49674 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1EP49674 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1EP49674 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1EP49674 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1EP49674 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.65■□□□□ 0.26
CSNK1EP49674 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1EP49674 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.65■□□□□ 0.26
CSNK1EP49674 SPDYE14P-201ENST00000442619 822 ntBASIC16.65■□□□□ 0.26
CSNK1EP49674 AC002472.2-201ENST00000442739 958 ntBASIC16.65■□□□□ 0.26
CSNK1EP49674 UGT1A2P-201ENST00000454886 866 ntBASIC16.65■□□□□ 0.26
CSNK1EP49674 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CSNK1EP49674 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1EP49674 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1EP49674 AC109635.5-201ENST00000533593 962 ntBASIC16.65■□□□□ 0.26
CSNK1EP49674 SLC25A39P2-201ENST00000537614 270 ntBASIC16.65■□□□□ 0.26
CSNK1EP49674 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.65■□□□□ 0.26
CSNK1EP49674 AC140878.1-201ENST00000565277 250 ntBASIC16.65■□□□□ 0.26
CSNK1EP49674 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1EP49674 RN7SL204P-201ENST00000582831 262 ntBASIC16.65■□□□□ 0.26
CSNK1EP49674 AL390754.1-201ENST00000619088 582 ntBASIC16.65■□□□□ 0.26
CSNK1EP49674 AF228730.6-201ENST00000641497 218 ntBASIC16.65■□□□□ 0.26
CSNK1EP49674 AC084121.3-201ENST00000641716 218 ntBASIC16.65■□□□□ 0.26
CSNK1EP49674 AC105233.6-201ENST00000642093 218 ntBASIC16.65■□□□□ 0.26
CSNK1EP49674 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CSNK1EP49674 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CSNK1EP49674 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1EP49674 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.65■□□□□ 0.26
CSNK1EP49674 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.65■□□□□ 0.26
CSNK1EP49674 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.65■□□□□ 0.26
CSNK1EP49674 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1EP49674 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1EP49674 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.65■□□□□ 0.26
CSNK1EP49674 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1EP49674 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1EP49674 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CSNK1EP49674 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
CSNK1EP49674 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1EP49674 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1EP49674 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1EP49674 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1EP49674 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CSNK1EP49674 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1EP49674 WASH6P-202ENST00000359512 1437 ntBASIC16.64■□□□□ 0.25
CSNK1EP49674 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.64■□□□□ 0.25
CSNK1EP49674 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CSNK1EP49674 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1EP49674 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1EP49674 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
CSNK1EP49674 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1EP49674 SPDYE7P-202ENST00000420373 878 ntBASIC16.64■□□□□ 0.25
CSNK1EP49674 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
CSNK1EP49674 TERF1P3-201ENST00000505638 1227 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms