Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.72■□□□□ 0.59
KRT9P35527 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT9P35527 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT9P35527 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KRT9P35527 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.72■□□□□ 0.59
KRT9P35527 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.72■□□□□ 0.59
KRT9P35527 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KRT9P35527 LINC02199-201ENST00000506655 2702 ntBASIC18.72■□□□□ 0.59
KRT9P35527 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
KRT9P35527 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.72■□□□□ 0.59
KRT9P35527 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT9P35527 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
KRT9P35527 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT9P35527 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
KRT9P35527 KRT17P6-201ENST00000453795 1220 ntBASIC18.72■□□□□ 0.59
KRT9P35527 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.72■□□□□ 0.59
KRT9P35527 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.72■□□□□ 0.59
KRT9P35527 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.72■□□□□ 0.59
KRT9P35527 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KRT9P35527 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.72■□□□□ 0.59
KRT9P35527 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT9P35527 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.72■□□□□ 0.59
KRT9P35527 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT9P35527 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT9P35527 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
KRT9P35527 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT9P35527 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KRT9P35527 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT9P35527 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
KRT9P35527 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
KRT9P35527 CICP6-201ENST00000457191 2729 ntBASIC18.72■□□□□ 0.59
KRT9P35527 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KRT9P35527 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT9P35527 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT9P35527 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.71■□□□□ 0.59
KRT9P35527 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT9P35527 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT9P35527 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT9P35527 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KRT9P35527 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT9P35527 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT9P35527 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT9P35527 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
KRT9P35527 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
KRT9P35527 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.71■□□□□ 0.59
KRT9P35527 AL662844.4-201ENST00000606367 2838 ntBASIC18.71■□□□□ 0.59
KRT9P35527 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT9P35527 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
KRT9P35527 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.71■□□□□ 0.59
KRT9P35527 AL135999.2-201ENST00000622438 1686 ntBASIC18.71■□□□□ 0.59
KRT9P35527 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT9P35527 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
KRT9P35527 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.71■□□□□ 0.59
KRT9P35527 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.71■□□□□ 0.59
KRT9P35527 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.71■□□□□ 0.59
KRT9P35527 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.71■□□□□ 0.59
KRT9P35527 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.71■□□□□ 0.59
KRT9P35527 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
KRT9P35527 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
KRT9P35527 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT9P35527 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.71■□□□□ 0.59
KRT9P35527 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
KRT9P35527 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT9P35527 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.71■□□□□ 0.59
KRT9P35527 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
KRT9P35527 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
KRT9P35527 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
KRT9P35527 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT9P35527 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.7■□□□□ 0.58
KRT9P35527 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
KRT9P35527 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
KRT9P35527 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
KRT9P35527 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRT9P35527 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT9P35527 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
KRT9P35527 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT9P35527 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT9P35527 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRT9P35527 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
KRT9P35527 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
KRT9P35527 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRT9P35527 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.7■□□□□ 0.58
KRT9P35527 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.7■□□□□ 0.58
KRT9P35527 AP000867.3-201ENST00000524675 377 ntBASIC18.7■□□□□ 0.58
KRT9P35527 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.7■□□□□ 0.58
KRT9P35527 MIR3180-1-201ENST00000580374 94 ntBASIC18.7■□□□□ 0.58
KRT9P35527 MIR3180-3-201ENST00000584616 94 ntBASIC18.7■□□□□ 0.58
KRT9P35527 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.7■□□□□ 0.58
KRT9P35527 NPAP1P7-201ENST00000613027 823 ntBASIC18.7■□□□□ 0.58
KRT9P35527 AC093458.2-201ENST00000623150 629 ntBASIC18.7■□□□□ 0.58
KRT9P35527 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.7■□□□□ 0.58
KRT9P35527 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.7■□□□□ 0.58
KRT9P35527 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRT9P35527 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
KRT9P35527 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
KRT9P35527 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT9P35527 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
KRT9P35527 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
KRT9P35527 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.7■□□□□ 0.58
KRT9P35527 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms