Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.24■□□□□ 0.35
XPAP23025 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
XPAP23025 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.24■□□□□ 0.35
XPAP23025 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.24■□□□□ 0.35
XPAP23025 AC005332.8-201ENST00000622750 2735 ntBASIC17.24■□□□□ 0.35
XPAP23025 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
XPAP23025 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
XPAP23025 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XPAP23025 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.24■□□□□ 0.35
XPAP23025 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XPAP23025 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
XPAP23025 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XPAP23025 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XPAP23025 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XPAP23025 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
XPAP23025 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
XPAP23025 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.24■□□□□ 0.35
XPAP23025 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.24■□□□□ 0.35
XPAP23025 PRSS29P-201ENST00000440800 595 ntBASIC17.24■□□□□ 0.35
XPAP23025 VN2R19P-201ENST00000442399 1052 ntBASIC17.24■□□□□ 0.35
XPAP23025 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.24■□□□□ 0.35
XPAP23025 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
XPAP23025 AC064836.3-201ENST00000607928 673 ntBASIC17.24■□□□□ 0.35
XPAP23025 AC010654.1-201ENST00000615722 808 ntBASIC17.24■□□□□ 0.35
XPAP23025 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XPAP23025 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.24■□□□□ 0.35
XPAP23025 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
XPAP23025 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.24■□□□□ 0.35
XPAP23025 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XPAP23025 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
XPAP23025 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.24■□□□□ 0.35
XPAP23025 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
XPAP23025 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XPAP23025 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
XPAP23025 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
XPAP23025 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
XPAP23025 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
XPAP23025 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
XPAP23025 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
XPAP23025 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
XPAP23025 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
XPAP23025 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
XPAP23025 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
XPAP23025 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
XPAP23025 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
XPAP23025 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.23■□□□□ 0.35
XPAP23025 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
XPAP23025 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
XPAP23025 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.23■□□□□ 0.35
XPAP23025 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.23■□□□□ 0.35
XPAP23025 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.23■□□□□ 0.35
XPAP23025 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
XPAP23025 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.23■□□□□ 0.35
XPAP23025 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
XPAP23025 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
XPAP23025 AC093525.9-201ENST00000624961 1746 ntBASIC17.23■□□□□ 0.35
XPAP23025 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
XPAP23025 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
XPAP23025 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.23■□□□□ 0.35
XPAP23025 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
XPAP23025 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.23■□□□□ 0.35
XPAP23025 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
XPAP23025 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.23■□□□□ 0.35
XPAP23025 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
XPAP23025 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
XPAP23025 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
XPAP23025 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
XPAP23025 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
XPAP23025 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
XPAP23025 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
XPAP23025 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
XPAP23025 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
XPAP23025 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
XPAP23025 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
XPAP23025 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
XPAP23025 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
XPAP23025 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
XPAP23025 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
XPAP23025 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.22■□□□□ 0.35
XPAP23025 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
XPAP23025 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.22■□□□□ 0.35
XPAP23025 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
XPAP23025 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.22■□□□□ 0.35
XPAP23025 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
XPAP23025 AL671883.3-201ENST00000603274 991 ntBASIC17.22■□□□□ 0.35
XPAP23025 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.22■□□□□ 0.35
XPAP23025 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.22■□□□□ 0.35
XPAP23025 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
XPAP23025 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
XPAP23025 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
XPAP23025 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
XPAP23025 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
XPAP23025 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
XPAP23025 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
XPAP23025 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
XPAP23025 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
XPAP23025 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
XPAP23025 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
XPAP23025 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
XPAP23025 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms